Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC062022.1-201ENST00000451026 1684 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 RNU1-134P-201ENST00000362935 165 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 SNORA51.1-201ENST00000363243 140 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AL512422.1-201ENST00000407033 553 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 RN7SKP121-201ENST00000410842 305 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC098592.2-201ENST00000413158 265 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AL357078.2-201ENST00000416486 427 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 TXNP2-201ENST00000443918 295 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AL353718.1-201ENST00000451028 517 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC104849.1-201ENST00000462623 405 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 RN7SL174P-201ENST00000475578 289 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC093719.1-201ENST00000480427 441 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC008628.1-201ENST00000508663 265 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 SUMO2P7-201ENST00000511179 285 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 SNORA81.2-201ENST00000516868 170 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AP003396.4-201ENST00000527574 265 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC068305.2-201ENST00000550567 1205 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC007956.1-201ENST00000555623 542 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 NPM1P5-201ENST00000557228 838 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 OR4H6P-202ENST00000603819 340 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC016542.1-201ENST00000608259 493 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AL512506.1-201ENST00000613918 449 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC008957.3-201ENST00000624112 2242 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 AC068446.1-201ENST00000556425 1549 ntBASIC6.34□□□□□ -1.39
HMGB4Q8WW32 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.4
HMGB4Q8WW32 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMGB4Q8WW32 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
HMGB4Q8WW32 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMGB4Q8WW32 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMGB4Q8WW32 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMGB4Q8WW32 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 SNORA17A-201ENST00000391185 133 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AMZ2P2-201ENST00000406819 1057 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 VN1R31P-201ENST00000417498 730 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 RPS7P14-201ENST00000426405 583 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC074367.1-201ENST00000438685 1125 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 RPL31P15-201ENST00000449770 338 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AL139156.3-201ENST00000454802 394 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 RN7SL214P-201ENST00000487317 265 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 MTND3P3-201ENST00000505004 126 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC106800.3-201ENST00000511389 308 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 SNORD46.2-201ENST00000516021 102 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 RNA5SP271-201ENST00000516700 88 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 RN7SKP98-201ENST00000517070 156 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 SEC11B-201ENST00000518383 499 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC022826.1-201ENST00000519383 805 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC068768.2-201ENST00000602352 343 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC027243.2-201ENST00000602530 724 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AL953862.2-201ENST00000603089 820 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC144521.1-201ENST00000607148 956 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC022106.1-201ENST00000612834 766 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC245014.3-201ENST00000618589 347 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC253576.2-201ENST00000618815 580 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms