Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC018448.2-201ENST00000548295 305 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC121758.1-202ENST00000556917 658 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC090312.2-201ENST00000582687 378 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC005730.3-201ENST00000583067 366 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 KPNA2P3-201ENST00000584190 848 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC233280.2-201ENST00000603917 1070 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AP000907.4-201ENST00000604143 237 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 RN7SL715P-201ENST00000606972 286 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 SNORD91A-202ENST00000609620 191 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AL592295.2-201ENST00000612578 206 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC023310.4-201ENST00000613130 650 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 Y_RNA.804-201ENST00000615262 101 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC104260.1-201ENST00000616660 539 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC079228.1-201ENST00000624774 1049 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 OLMALINC-206ENST00000641799 1195 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC090771.1-201ENST00000585803 1618 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 ASNSP6-201ENST00000592770 1618 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 NBPF25P-201ENST00000606775 2019 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 CTAGE3P-201ENST00000454280 2404 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 ENSA-209ENST00000369016 923 ntTSL 5 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AL050335.1-201ENST00000396909 869 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 RPS3AP23-201ENST00000401762 784 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 USP9YP13-201ENST00000417797 480 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 MTCO3P1-205ENST00000422088 832 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 MTND1P14-201ENST00000427400 950 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 HSD3BP5-201ENST00000434856 1132 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC004006.1-201ENST00000434994 377 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 RPE-207ENST00000435437 858 ntTSL 2 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 OSTCP2-201ENST00000437956 444 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC092001.1-201ENST00000453012 261 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 MTND1P11-201ENST00000456661 876 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 snoU109.1-201ENST00000459339 135 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC112206.1-201ENST00000468416 477 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 RN7SL702P-201ENST00000488394 292 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC098799.3-201ENST00000506095 438 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 RPS20-204ENST00000519606 424 ntTSL 3 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 OR6M2P-201ENST00000529831 871 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC008126.1-201ENST00000549019 480 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC092133.1-201ENST00000565828 719 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 RN7SL123P-201ENST00000577239 292 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC026150.3-201ENST00000602595 499 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AL354760.1-201ENST00000608357 643 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC092954.2-201ENST00000609103 430 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 FAM30B-201ENST00000611556 397 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC131902.3-201ENST00000611767 581 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 AC108479.2-201ENST00000617314 601 ntBASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 KDM5DP1-201ENST00000622542 298 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms