Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC016583.1-201ENST00000624221 2431 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 MIR191-201ENST00000384873 92 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 RPL23AP17-201ENST00000401064 499 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 RN7SKP199-201ENST00000410325 305 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AL035422.1-201ENST00000414193 397 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 RPS26P38-201ENST00000414476 348 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 OR3D1P-201ENST00000438288 955 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 KF459542.1-201ENST00000450908 553 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 RAB28P2-201ENST00000454299 641 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 RPL12P30-201ENST00000488389 499 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 RN7SKP157-201ENST00000516174 282 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC244502.2-201ENST00000543361 851 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AL731537.2-201ENST00000561565 951 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 MT1CP-201ENST00000567054 174 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 MTND1P8-201ENST00000571424 950 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC004232.2-201ENST00000574245 821 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 MIR4701-201ENST00000583094 63 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC017076.1-201ENST00000607613 578 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AL135999.3-201ENST00000610501 812 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 MIR6813-201ENST00000621638 56 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AC024341.1-201ENST00000526444 1552 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 AL591135.1-201ENST00000401578 5914 ntBASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZNF549Q6P9A3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 RN7SKP184-201ENST00000362348 333 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 MIR188-201ENST00000385034 86 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 RN7SKP144-201ENST00000411108 279 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AL096829.1-201ENST00000413677 457 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 RPS15AP30-201ENST00000420976 390 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 RPL34P27-201ENST00000428810 349 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 SCAND3P1-201ENST00000439854 1060 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 RPL29P23-201ENST00000486188 442 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 RN7SL612P-201ENST00000497704 295 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 BTG1P1-201ENST00000540396 508 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AL049840.6-202ENST00000603373 279 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC244100.4-201ENST00000617747 388 ntBASIC6.03□□□□□ -1.44
ZNF549Q6P9A3 AC048344.4-201ENST00000619744 527 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms