Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OFD1P18Y-201ENST00000420889 959 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 MRPS36P1-201ENST00000421291 307 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 UQCRHP1-204ENST00000424609 274 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC097721.1-201ENST00000427150 1253 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 MTCO1P43-201ENST00000431831 488 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 ARPC3P1-201ENST00000437218 533 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 TXNP2-201ENST00000443918 295 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 IGBP1P3-201ENST00000447449 1000 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 MTND1P18-201ENST00000448191 573 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 RN7SL390P-201ENST00000470634 284 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 RN7SL797P-201ENST00000486314 297 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 HNRNPCP1-201ENST00000556181 766 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC079171.1-201ENST00000568788 914 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 GARSP1-201ENST00000570895 719 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC087045.1-201ENST00000605856 382 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC063962.1-201ENST00000608199 521 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 MIR6806-201ENST00000622141 64 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AL133243.2-201ENST00000610331 1621 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 RN7SKP174-201ENST00000363803 330 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 SNORA7A-201ENST00000384765 139 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 VDAC2P1-201ENST00000399358 958 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 FDPSP5-201ENST00000399474 1057 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 RPL23AP85-201ENST00000421838 433 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 ARL6IP1P2-201ENST00000431356 563 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 MTND1P32-201ENST00000433043 938 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 MORF4L1P5-201ENST00000433352 961 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC245291.3-201ENST00000443400 292 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC007383.1-201ENST00000445875 636 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 EEF1B2P3-201ENST00000447718 678 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC013399.1-201ENST00000450311 418 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 RPS26P11-201ENST00000463445 348 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 RPS26P6-201ENST00000475156 348 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 RPL21P47-201ENST00000483696 477 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 MTCO1P31-201ENST00000506355 492 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 HMGB1P47-201ENST00000511281 589 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 TBCA-206ENST00000518338 551 ntTSL 2 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms