Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC093155.2-201ENST00000420734 937 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 NMD3P2-201ENST00000421815 761 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AL445665.1-202ENST00000452436 324 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AC092865.4-201ENST00000477936 615 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AC008629.2-201ENST00000503783 483 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AC110056.1-201ENST00000525759 911 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 OR11H2-202ENST00000641517 1085 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 CDY3P-201ENST00000454543 1618 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 RPL12P16-201ENST00000431098 498 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AL451136.1-201ENST00000435399 325 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 RPS12P17-201ENST00000438591 377 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 DNAJC19P5-201ENST00000443295 316 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 BZW1P1-201ENST00000454901 1240 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 RPS23P6-201ENST00000466136 431 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AC023245.1-201ENST00000468501 517 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AL122020.1-201ENST00000472287 459 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 RN7SL214P-201ENST00000487317 265 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AC114728.1-201ENST00000488289 483 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 KCTD9P4-201ENST00000526766 1166 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AL136131.3-201ENST00000607600 188 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AL157762.1-201ENST00000619612 415 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 OR4G1P-202ENST00000641173 1788 ntBASIC7.03□□□□□ -1.28
SHROOM1Q2M3G4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SHROOM1Q2M3G4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SHROOM1Q2M3G4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SHROOM1Q2M3G4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 AL031651.1-201ENST00000615357 1438 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 OR5AQ1P-203ENST00000641818 1529 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 MIR323A-201ENST00000362199 86 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 SNORA64.1-201ENST00000362600 132 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 NPM1P38-201ENST00000403835 865 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 RPL36P18-201ENST00000419316 318 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 RPS7P3-201ENST00000443360 580 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 AL022237.1-201ENST00000446663 358 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 YWHAEP1-201ENST00000453697 763 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 RPSAP39-201ENST00000467439 883 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms