Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC116165.3-201ENST00000614524 400 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC127071.2-201ENST00000623293 527 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC020633.1-201ENST00000468439 2247 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC011416.1-201ENST00000514947 1732 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC239868.2-201ENST00000564237 4527 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC138907.8-201ENST00000623981 2256 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 UGT2B24P-201ENST00000514441 1597 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC007842.1-201ENST00000597336 2039 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SCN1BQ07699 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 RNU6-1251P-201ENST00000364502 107 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN1BQ07699 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.55□□□□□ -1.52
SCN1BQ07699 PPIAP23-201ENST00000420099 497 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 ELOBP4-201ENST00000423418 296 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AC009303.1-201ENST00000426307 352 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AL596268.1-201ENST00000427910 1048 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 BX276092.6-201ENST00000430476 250 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 RPL3P11-201ENST00000434028 1146 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AC003989.1-201ENST00000434569 565 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 HMGB3P10-201ENST00000434734 572 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 RPS7P4-201ENST00000444127 582 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AC092967.1-201ENST00000449016 481 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 BX276092.8-201ENST00000455722 250 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN1BQ07699 UOX-201ENST00000471089 899 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN1BQ07699 STRADBP1-201ENST00000478954 1281 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 RN7SL37P-201ENST00000490461 307 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC022206.1-201ENST00000495947 347 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN1BQ07699 CYP4F27P-201ENST00000514557 494 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC007068.2-201ENST00000543168 395 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 AL358913.1-201ENST00000554342 121 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC005726.4-201ENST00000582858 458 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC027334.1-201ENST00000603257 310 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 DIMT1P1-201ENST00000603970 763 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC016911.1-201ENST00000613297 452 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AP003108.4-201ENST00000623917 878 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN1BQ07699 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN1BQ07699 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN1BQ07699 AC022325.1-201ENST00000502748 2199 ntBASIC5.55□□□□□ -1.52
SCN1BQ07699 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN1BQ07699 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN1BQ07699 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC096921.2-201ENST00000561507 1916 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.54□□□□□ -1.52
SCN1BQ07699 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN1BQ07699 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SCN1BQ07699 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN1BQ07699 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN1BQ07699 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN1BQ07699 RNU6-152P-201ENST00000384037 107 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 LDHAP5-201ENST00000394996 622 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SCN1BQ07699 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 OR52N3P-201ENST00000413417 934 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms