Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 AC092724.1-201ENST00000624623 3397 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 SHQ1P1-201ENST00000437111 1544 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.01□□□□□ -1.29
GABPAQ06546 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.01□□□□□ -1.29
GABPAQ06546 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
GABPAQ06546 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 AC104162.1-201ENST00000430831 2382 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.01□□□□□ -1.29
GABPAQ06546 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
GABPAQ06546 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 MIR375-201ENST00000362103 64 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 RPS4XP5-201ENST00000419038 768 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.01□□□□□ -1.29
GABPAQ06546 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.01□□□□□ -1.29
GABPAQ06546 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.01□□□□□ -1.29
GABPAQ06546 AC064862.4-201ENST00000442180 334 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 AC079922.1-201ENST00000443291 359 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 RN7SL352P-201ENST00000466002 277 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.01□□□□□ -1.29
GABPAQ06546 RPS17P15-201ENST00000475609 349 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 CCDC11P1-201ENST00000503137 1162 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.01□□□□□ -1.29
GABPAQ06546 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 uc_338.26-201ENST00000612659 160 ntBASIC7.01□□□□□ -1.29
GABPAQ06546 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.01□□□□□ -1.29
GABPAQ06546 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
GABPAQ06546 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
GABPAQ06546 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
GABPAQ06546 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
GABPAQ06546 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7□□□□□ -1.29
GABPAQ06546 LRRC37A16P-202ENST00000586022 3725 ntBASIC7□□□□□ -1.29
GABPAQ06546 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
GABPAQ06546 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
GABPAQ06546 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7□□□□□ -1.29
GABPAQ06546 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
GABPAQ06546 NEPNP-201ENST00000404786 1371 ntBASIC7□□□□□ -1.29
GABPAQ06546 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
GABPAQ06546 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
GABPAQ06546 SEPT7P2-202ENST00000398921 823 ntBASIC7□□□□□ -1.29
GABPAQ06546 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
GABPAQ06546 MRPL53P1-201ENST00000414323 319 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC015977.1-201ENST00000418887 292 ntBASIC7□□□□□ -1.29
GABPAQ06546 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7□□□□□ -1.29
GABPAQ06546 AC127526.2-201ENST00000426436 775 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7□□□□□ -1.29
GABPAQ06546 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7□□□□□ -1.29
GABPAQ06546 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7□□□□□ -1.29
GABPAQ06546 AC093166.4-201ENST00000457867 318 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC023141.9-201ENST00000458734 412 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC124945.1-201ENST00000485133 188 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7□□□□□ -1.29
GABPAQ06546 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7□□□□□ -1.29
GABPAQ06546 IGLV3-30-201ENST00000524362 298 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7□□□□□ -1.29
GABPAQ06546 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7□□□□□ -1.29
GABPAQ06546 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7□□□□□ -1.29
GABPAQ06546 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7□□□□□ -1.29
GABPAQ06546 AC137695.1-201ENST00000604126 489 ntBASIC7□□□□□ -1.29
GABPAQ06546 AL683813.2-201ENST00000605245 502 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC145423.1-201ENST00000605712 336 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC004836.1-201ENST00000623032 634 ntBASIC7□□□□□ -1.29
GABPAQ06546 AC022919.1-201ENST00000624979 626 ntBASIC7□□□□□ -1.29
GABPAQ06546 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7□□□□□ -1.29
GABPAQ06546 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7□□□□□ -1.29
GABPAQ06546 AC087269.2-201ENST00000641764 975 ntBASIC7□□□□□ -1.29
GABPAQ06546 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
GABPAQ06546 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7□□□□□ -1.29
GABPAQ06546 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7□□□□□ -1.29
GABPAQ06546 OR52B5P-204ENST00000641744 3467 ntBASIC7□□□□□ -1.29
GABPAQ06546 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7□□□□□ -1.29
GABPAQ06546 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
GABPAQ06546 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
GABPAQ06546 DOCK11P1-201ENST00000553480 5932 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 AC022034.1-201ENST00000512867 2156 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
GABPAQ06546 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms