Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 UGT2B27P-201ENST00000505092 1620 ntBASIC6.74□□□□□ -1.33
YBX1P67809 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.74□□□□□ -1.33
YBX1P67809 MAPK10-344ENST00000641718 3746 ntBASIC6.74□□□□□ -1.33
YBX1P67809 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
YBX1P67809 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
YBX1P67809 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
YBX1P67809 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.74□□□□□ -1.33
YBX1P67809 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.74□□□□□ -1.33
YBX1P67809 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
YBX1P67809 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
YBX1P67809 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.74□□□□□ -1.33
YBX1P67809 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
YBX1P67809 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
YBX1P67809 AC104837.1-201ENST00000444644 1587 ntBASIC6.74□□□□□ -1.33
YBX1P67809 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 AC105114.1-201ENST00000624795 1862 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 OR2A3P-202ENST00000641249 1776 ntBASIC6.73□□□□□ -1.33
YBX1P67809 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
YBX1P67809 AC011503.2-201ENST00000594230 1500 ntBASIC6.73□□□□□ -1.33
YBX1P67809 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
YBX1P67809 OR10D1P-201ENST00000355343 936 ntBASIC6.73□□□□□ -1.33
YBX1P67809 RNU6-304P-201ENST00000364855 107 ntBASIC6.73□□□□□ -1.33
YBX1P67809 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
YBX1P67809 RN7SKP62-201ENST00000384539 329 ntBASIC6.73□□□□□ -1.33
YBX1P67809 Y_RNA.559-201ENST00000384686 107 ntBASIC6.73□□□□□ -1.33
YBX1P67809 MTND4LP20-201ENST00000402379 270 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AL451046.1-201ENST00000406097 534 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AC099535.1-201ENST00000408928 371 ntBASIC6.73□□□□□ -1.33
YBX1P67809 RN7SKP268-201ENST00000411107 316 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.73□□□□□ -1.33
YBX1P67809 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 AC009362.1-201ENST00000427253 406 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AC013410.1-201ENST00000436223 1232 ntBASIC6.73□□□□□ -1.33
YBX1P67809 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 ISCA1P2-201ENST00000438679 421 ntBASIC6.73□□□□□ -1.33
YBX1P67809 ARL5AP3-201ENST00000439327 386 ntBASIC6.73□□□□□ -1.33
YBX1P67809 MTATP6P23-201ENST00000440153 476 ntBASIC6.73□□□□□ -1.33
YBX1P67809 RPL6P5-201ENST00000445678 828 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 RPL34P34-201ENST00000465389 354 ntBASIC6.73□□□□□ -1.33
YBX1P67809 STRADBP1-201ENST00000478954 1281 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 AP005202.1-201ENST00000489915 867 ntBASIC6.73□□□□□ -1.33
YBX1P67809 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.73□□□□□ -1.33
YBX1P67809 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.73□□□□□ -1.33
YBX1P67809 AL109628.1-201ENST00000556877 366 ntBASIC6.73□□□□□ -1.33
YBX1P67809 ARGFXP2-201ENST00000579304 949 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.73□□□□□ -1.33
YBX1P67809 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 AC124312.4-201ENST00000605533 310 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AL139286.2-201ENST00000606838 396 ntBASIC6.73□□□□□ -1.33
YBX1P67809 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.73□□□□□ -1.33
YBX1P67809 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.73□□□□□ -1.33
YBX1P67809 Z69908.1-201ENST00000622603 247 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 AC006453.3-201ENST00000635891 377 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AL034408.1-201ENST00000637712 664 ntBASIC6.73□□□□□ -1.33
YBX1P67809 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
YBX1P67809 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.73□□□□□ -1.33
YBX1P67809 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.73□□□□□ -1.33
YBX1P67809 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
YBX1P67809 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms