Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH6P55285 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH6P55285 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH6P55285 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CDH6P55285 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH6P55285 SAMMSON-210ENST00000641260 1308 ntBASIC6.24□□□□□ -1.41
CDH6P55285 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH6P55285 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 RBMY1HP-201ENST00000382759 1389 ntBASIC6.23□□□□□ -1.41
CDH6P55285 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
CDH6P55285 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 AC139426.3-201ENST00000605648 2059 ntBASIC6.23□□□□□ -1.41
CDH6P55285 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH6P55285 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH6P55285 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.23□□□□□ -1.41
CDH6P55285 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.23□□□□□ -1.41
CDH6P55285 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH6P55285 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 AC245884.2-201ENST00000426257 404 ntBASIC6.23□□□□□ -1.41
CDH6P55285 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH6P55285 RPS3AP38-201ENST00000435889 763 ntBASIC6.23□□□□□ -1.41
CDH6P55285 BX679664.2-201ENST00000439282 283 ntBASIC6.23□□□□□ -1.41
CDH6P55285 TRIM60P16-201ENST00000444048 694 ntBASIC6.23□□□□□ -1.41
CDH6P55285 EEF1B2P3-201ENST00000447718 678 ntBASIC6.23□□□□□ -1.41
CDH6P55285 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH6P55285 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH6P55285 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.23□□□□□ -1.41
CDH6P55285 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH6P55285 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.23□□□□□ -1.41
CDH6P55285 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH6P55285 MAPK10-350ENST00000641777 965 ntBASIC6.23□□□□□ -1.41
CDH6P55285 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH6P55285 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CDH6P55285 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
CDH6P55285 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH6P55285 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH6P55285 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH6P55285 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CDH6P55285 SNRPEP6-201ENST00000407465 277 ntBASIC6.22□□□□□ -1.41
CDH6P55285 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 AC104164.1-201ENST00000460282 590 ntBASIC6.22□□□□□ -1.41
CDH6P55285 TRBV5-2-201ENST00000489095 273 ntBASIC6.22□□□□□ -1.41
CDH6P55285 AC122718.2-201ENST00000505325 591 ntBASIC6.22□□□□□ -1.41
CDH6P55285 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.22□□□□□ -1.41
CDH6P55285 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 MIR6806-201ENST00000622141 64 ntBASIC6.22□□□□□ -1.41
CDH6P55285 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 AL161756.3-201ENST00000641216 2071 ntBASIC6.22□□□□□ -1.41
CDH6P55285 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH6P55285 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH6P55285 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH6P55285 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH6P55285 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH6P55285 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.21□□□□□ -1.41
CDH6P55285 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms