Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AL645933.2-201ENST00000606743 1207 ntBASIC5.7□□□□□ -1.5
EFNA3P52797 AL136097.3-201ENST00000611097 505 ntBASIC5.7□□□□□ -1.5
EFNA3P52797 AC096861.1-201ENST00000616652 240 ntBASIC5.7□□□□□ -1.5
EFNA3P52797 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.7□□□□□ -1.5
EFNA3P52797 AC129915.3-201ENST00000634128 948 ntBASIC5.7□□□□□ -1.5
EFNA3P52797 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.7□□□□□ -1.5
EFNA3P52797 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.7□□□□□ -1.5
EFNA3P52797 AF287957.1-201ENST00000607368 1595 ntBASIC5.7□□□□□ -1.5
EFNA3P52797 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EFNA3P52797 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.7□□□□□ -1.5
EFNA3P52797 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
EFNA3P52797 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.7□□□□□ -1.5
EFNA3P52797 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EFNA3P52797 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EFNA3P52797 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EFNA3P52797 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
EFNA3P52797 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
EFNA3P52797 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
EFNA3P52797 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
EFNA3P52797 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
EFNA3P52797 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
EFNA3P52797 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 MTCO1P28-201ENST00000574177 1528 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 AL096800.1-201ENST00000405326 893 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.69□□□□□ -1.5
EFNA3P52797 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 RPS29P14-201ENST00000431518 171 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.69□□□□□ -1.5
EFNA3P52797 NDUFS5P5-201ENST00000437256 321 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 AC016724.1-201ENST00000453215 421 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.69□□□□□ -1.5
EFNA3P52797 AC060775.1-201ENST00000518241 520 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 IGKV2-4-201ENST00000523070 340 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 AP003080.1-202ENST00000526526 915 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.69□□□□□ -1.5
EFNA3P52797 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.69□□□□□ -1.5
EFNA3P52797 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.69□□□□□ -1.5
EFNA3P52797 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.69□□□□□ -1.5
EFNA3P52797 AC137695.1-201ENST00000604126 489 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 SNX18P12-201ENST00000624821 759 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
EFNA3P52797 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 AL353763.1-201ENST00000624467 1628 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.69□□□□□ -1.5
EFNA3P52797 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
EFNA3P52797 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 AC034229.2-201ENST00000566945 2508 ntBASIC5.69□□□□□ -1.5
EFNA3P52797 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.69□□□□□ -1.5
EFNA3P52797 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EFNA3P52797 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
EFNA3P52797 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
EFNA3P52797 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EFNA3P52797 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
EFNA3P52797 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.68□□□□□ -1.5
EFNA3P52797 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.68□□□□□ -1.5
EFNA3P52797 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
EFNA3P52797 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
EFNA3P52797 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
EFNA3P52797 RNU1-150P-201ENST00000362491 162 ntBASIC5.68□□□□□ -1.5
EFNA3P52797 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.68□□□□□ -1.5
EFNA3P52797 SUGT1P2-201ENST00000379452 992 ntBASIC5.68□□□□□ -1.5
EFNA3P52797 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EFNA3P52797 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.68□□□□□ -1.5
EFNA3P52797 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.68□□□□□ -1.5
EFNA3P52797 IPPKP1-201ENST00000422501 768 ntBASIC5.68□□□□□ -1.5
EFNA3P52797 BX323845.3-201ENST00000428215 527 ntBASIC5.68□□□□□ -1.5
EFNA3P52797 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.68□□□□□ -1.5
EFNA3P52797 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.68□□□□□ -1.5
EFNA3P52797 AL445466.1-201ENST00000448432 357 ntBASIC5.68□□□□□ -1.5
EFNA3P52797 AC005077.1-201ENST00000449226 375 ntBASIC5.68□□□□□ -1.5
EFNA3P52797 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.68□□□□□ -1.5
EFNA3P52797 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms