Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
MRE11P49959 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.48□□□□□ -1.21
MRE11P49959 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.48□□□□□ -1.21
MRE11P49959 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.48□□□□□ -1.21
MRE11P49959 AC136624.1-201ENST00000400791 413 ntBASIC7.48□□□□□ -1.21
MRE11P49959 SNORA81-201ENST00000408493 178 ntBASIC7.48□□□□□ -1.21
MRE11P49959 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.48□□□□□ -1.21
MRE11P49959 BMS1P13-201ENST00000417301 885 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC007562.1-201ENST00000421819 517 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 AL590399.2-201ENST00000427536 309 ntBASIC7.48□□□□□ -1.21
MRE11P49959 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.48□□□□□ -1.21
MRE11P49959 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.48□□□□□ -1.21
MRE11P49959 AC003989.1-201ENST00000434569 565 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC074367.1-201ENST00000438685 1125 ntBASIC7.48□□□□□ -1.21
MRE11P49959 BX005266.3-201ENST00000443013 1075 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC079922.1-201ENST00000443291 359 ntBASIC7.48□□□□□ -1.21
MRE11P49959 BMS1P10-201ENST00000443754 1120 ntBASIC7.48□□□□□ -1.21
MRE11P49959 GAPDHP20-201ENST00000444107 1007 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC023274.2-201ENST00000445264 521 ntBASIC7.48□□□□□ -1.21
MRE11P49959 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.48□□□□□ -1.21
MRE11P49959 SNX18P26-201ENST00000458433 740 ntBASIC7.48□□□□□ -1.21
MRE11P49959 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.48□□□□□ -1.21
MRE11P49959 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.48□□□□□ -1.21
MRE11P49959 RN7SL101P-201ENST00000496350 279 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 NACAP6-201ENST00000509572 622 ntBASIC7.48□□□□□ -1.21
MRE11P49959 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.48□□□□□ -1.21
MRE11P49959 HMGN1P15-201ENST00000513870 295 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.48□□□□□ -1.21
MRE11P49959 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.48□□□□□ -1.21
MRE11P49959 AC090971.3-201ENST00000557871 1041 ntBASIC7.48□□□□□ -1.21
MRE11P49959 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.48□□□□□ -1.21
MRE11P49959 RN7SL230P-201ENST00000580835 303 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.48□□□□□ -1.21
MRE11P49959 AC011445.2-201ENST00000599274 173 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 AC004908.1-201ENST00000606572 541 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC027449.1-201ENST00000608890 407 ntBASIC7.48□□□□□ -1.21
MRE11P49959 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.48□□□□□ -1.21
MRE11P49959 AL050303.3-201ENST00000613704 284 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC010872.1-201ENST00000624225 675 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AC073263.3-201ENST00000624449 858 ntBASIC7.48□□□□□ -1.21
MRE11P49959 AP001052.1-201ENST00000626421 99 ntBASIC7.48□□□□□ -1.21
MRE11P49959 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.48□□□□□ -1.21
MRE11P49959 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 CCNT2P1-201ENST00000423082 1315 ntBASIC7.48□□□□□ -1.21
MRE11P49959 CIR1P2-201ENST00000514821 1342 ntBASIC7.48□□□□□ -1.21
MRE11P49959 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
MRE11P49959 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MRE11P49959 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MRE11P49959 AL731532.1-201ENST00000623972 4236 ntBASIC7.47□□□□□ -1.21
MRE11P49959 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
MRE11P49959 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MRE11P49959 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MRE11P49959 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MRE11P49959 GCNT6-201ENST00000379591 934 ntBASIC7.47□□□□□ -1.21
MRE11P49959 MIR99A-201ENST00000384906 81 ntBASIC7.47□□□□□ -1.21
MRE11P49959 FAUP2-201ENST00000394301 401 ntBASIC7.47□□□□□ -1.21
MRE11P49959 RNA5SP431-201ENST00000410312 120 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.47□□□□□ -1.21
MRE11P49959 OR5W1P-201ENST00000423705 938 ntBASIC7.47□□□□□ -1.21
MRE11P49959 RPL12P12-201ENST00000424633 501 ntBASIC7.47□□□□□ -1.21
MRE11P49959 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.47□□□□□ -1.21
MRE11P49959 OR13K1P-201ENST00000444577 975 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.47□□□□□ -1.21
MRE11P49959 AC093799.1-201ENST00000452411 499 ntBASIC7.47□□□□□ -1.21
MRE11P49959 SBDSP1-204ENST00000453858 737 ntBASIC7.47□□□□□ -1.21
MRE11P49959 RPSAP48-201ENST00000466509 889 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AC021006.1-201ENST00000489849 553 ntBASIC7.47□□□□□ -1.21
MRE11P49959 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.47□□□□□ -1.21
MRE11P49959 AL135933.1-201ENST00000498657 802 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AC093534.1-201ENST00000504977 132 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.47□□□□□ -1.21
MRE11P49959 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.47□□□□□ -1.21
MRE11P49959 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC7.47□□□□□ -1.21
MRE11P49959 AC084121.1-201ENST00000533882 835 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AL121579.2-201ENST00000555466 590 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.47□□□□□ -1.21
MRE11P49959 SETP3-201ENST00000581726 813 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.47□□□□□ -1.21
MRE11P49959 BNIP3P32-201ENST00000600015 554 ntBASIC7.47□□□□□ -1.21
MRE11P49959 BNIP3P31-201ENST00000604515 566 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms