Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RPS23P9-201ENST00000448848 438 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 FRG2FP-204ENST00000453982 852 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 RPL12P39-201ENST00000455456 496 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 AC079080.1-201ENST00000479841 822 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 AL079303.1-201ENST00000486611 463 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC010343.2-201ENST00000510162 224 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 TPM3P3-201ENST00000521343 354 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 MIR4428-201ENST00000584884 73 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 AC008507.3-201ENST00000585753 472 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 OR7E19P-202ENST00000589942 844 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC006453.3-201ENST00000635891 377 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CD40LGP29965 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 AC011503.2-201ENST00000594230 1500 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40LGP29965 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CD40LGP29965 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 AC083843.2-201ENST00000568248 6253 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CD40LGP29965 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 SNORA70.6-201ENST00000383934 134 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CD40LGP29965 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40LGP29965 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.36□□□□□ -1.55
CD40LGP29965 AL139184.1-202ENST00000422303 222 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 AC016908.1-201ENST00000442571 1219 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40LGP29965 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40LGP29965 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40LGP29965 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 CBX5P1-201ENST00000468470 561 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 AC124945.1-201ENST00000485133 188 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 FTH1P11-201ENST00000517577 551 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 CARSP2-201ENST00000520688 277 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40LGP29965 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40LGP29965 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40LGP29965 AL133481.2-203ENST00000607558 139 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 AC093635.1-201ENST00000609028 555 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 AL162574.1-201ENST00000615702 950 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 AC073857.1-201ENST00000625082 1054 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40LGP29965 AL031595.2-201ENST00000624215 19071 ntBASIC5.36□□□□□ -1.55
CD40LGP29965 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.36□□□□□ -1.55
CD40LGP29965 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40LGP29965 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 SMG1P5-202ENST00000529428 4219 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 SMG1P2-201ENST00000566127 4221 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40LGP29965 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms