Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.47□□□□□ -1.05
RXRBP28702 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 GLS-203ENST00000409215 632 ntTSL 4 BASIC8.47□□□□□ -1.05
RXRBP28702 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.47□□□□□ -1.05
RXRBP28702 AC244033.1-201ENST00000426826 870 ntBASIC8.47□□□□□ -1.05
RXRBP28702 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 AC073508.1-201ENST00000428866 656 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 AL512605.1-202ENST00000441919 381 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AL591719.1-201ENST00000444669 744 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AL359955.2-201ENST00000445380 353 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 CEACAMP10-202ENST00000495431 496 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC8.47□□□□□ -1.05
RXRBP28702 CCNHP1-201ENST00000513311 678 ntBASIC8.47□□□□□ -1.05
RXRBP28702 Y_RNA.688-201ENST00000516565 95 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 NPM1P35-201ENST00000533043 868 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.47□□□□□ -1.05
RXRBP28702 OSBPL9P5-201ENST00000542581 171 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC8.47□□□□□ -1.05
RXRBP28702 AC007599.1-201ENST00000568688 1174 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC023824.3-201ENST00000569003 562 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AP001496.3-201ENST00000580230 913 ntBASIC8.47□□□□□ -1.05
RXRBP28702 PIGPP4-201ENST00000584447 307 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 MTCO2P2-201ENST00000591258 225 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.47□□□□□ -1.05
RXRBP28702 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 AC092954.1-201ENST00000609121 445 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AC009032.1-201ENST00000617574 431 ntBASIC8.47□□□□□ -1.05
RXRBP28702 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 AC005277.2-201ENST00000617898 390 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AL031667.3-201ENST00000620124 655 ntBASIC8.47□□□□□ -1.05
RXRBP28702 TSHZ2-205ENST00000626626 670 ntBASIC8.47□□□□□ -1.05
RXRBP28702 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 AC026951.1-201ENST00000559530 2459 ntBASIC8.47□□□□□ -1.05
RXRBP28702 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
RXRBP28702 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
RXRBP28702 AC233968.1-201ENST00000611212 1300 ntBASIC8.47□□□□□ -1.05
RXRBP28702 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 Z97832.2-201ENST00000605896 4261 ntBASIC8.47□□□□□ -1.05
RXRBP28702 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
RXRBP28702 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.47□□□□□ -1.05
RXRBP28702 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.46□□□□□ -1.05
RXRBP28702 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
RXRBP28702 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 AC023818.2-201ENST00000623817 2304 ntBASIC8.46□□□□□ -1.05
RXRBP28702 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RXRBP28702 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 MIR375-201ENST00000362103 64 ntBASIC8.46□□□□□ -1.06
RXRBP28702 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 MIR550A3-201ENST00000390735 95 ntBASIC8.46□□□□□ -1.06
RXRBP28702 RPL22P22-201ENST00000395439 379 ntBASIC8.46□□□□□ -1.06
RXRBP28702 MIR1286-201ENST00000408112 78 ntBASIC8.46□□□□□ -1.06
RXRBP28702 MTND2P18-201ENST00000419962 1030 ntBASIC8.46□□□□□ -1.06
RXRBP28702 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.46□□□□□ -1.06
RXRBP28702 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
RXRBP28702 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC8.46□□□□□ -1.06
RXRBP28702 MTND2P20-201ENST00000440805 661 ntBASIC8.46□□□□□ -1.06
RXRBP28702 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC8.46□□□□□ -1.06
RXRBP28702 HIGD1AP16-201ENST00000450986 258 ntBASIC8.46□□□□□ -1.06
RXRBP28702 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.46□□□□□ -1.06
RXRBP28702 AC087672.1-201ENST00000479876 766 ntBASIC8.46□□□□□ -1.06
RXRBP28702 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 AC021220.1-201ENST00000507445 630 ntBASIC8.46□□□□□ -1.06
RXRBP28702 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 AC008494.2-201ENST00000514544 370 ntBASIC8.46□□□□□ -1.06
RXRBP28702 IGKV3D-31-201ENST00000519131 281 ntBASIC8.46□□□□□ -1.06
RXRBP28702 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms