Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 AC012254.3-201ENST00000591183 2117 ntBASIC5.11□□□□□ -1.59
CCL1P22362 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.11□□□□□ -1.59
CCL1P22362 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
CCL1P22362 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCL1P22362 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCL1P22362 RNU6-316P-201ENST00000391027 107 ntBASIC5.11□□□□□ -1.59
CCL1P22362 RPL7P58-201ENST00000402913 758 ntBASIC5.11□□□□□ -1.59
CCL1P22362 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.11□□□□□ -1.59
CCL1P22362 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.11□□□□□ -1.59
CCL1P22362 RPL35AP3-201ENST00000414680 288 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.11□□□□□ -1.59
CCL1P22362 RPS4XP5-201ENST00000419038 768 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.11□□□□□ -1.59
CCL1P22362 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.11□□□□□ -1.59
CCL1P22362 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 AC007383.1-201ENST00000445875 636 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AL445466.1-201ENST00000448432 357 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.11□□□□□ -1.59
CCL1P22362 PPIAP7-201ENST00000454070 489 ntBASIC5.11□□□□□ -1.59
CCL1P22362 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCL1P22362 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.11□□□□□ -1.59
CCL1P22362 RPL12P39-201ENST00000455456 496 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AC006539.1-201ENST00000481419 501 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.11□□□□□ -1.59
CCL1P22362 OR7E99P-201ENST00000505750 922 ntBASIC5.11□□□□□ -1.59
CCL1P22362 GUSBP9-201ENST00000510138 584 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.11□□□□□ -1.59
CCL1P22362 RNU2-45P-201ENST00000516068 187 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AP000620.1-201ENST00000527147 504 ntBASIC5.11□□□□□ -1.59
CCL1P22362 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.11□□□□□ -1.59
CCL1P22362 AL078601.3-201ENST00000573303 535 ntBASIC5.11□□□□□ -1.59
CCL1P22362 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 AL513327.3-201ENST00000602618 469 ntBASIC5.11□□□□□ -1.59
CCL1P22362 NANOGP3-201ENST00000605855 286 ntBASIC5.11□□□□□ -1.59
CCL1P22362 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.11□□□□□ -1.59
CCL1P22362 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.11□□□□□ -1.59
CCL1P22362 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 RBPJP7-201ENST00000442803 1447 ntBASIC5.11□□□□□ -1.59
CCL1P22362 RBPJP5-201ENST00000449433 1447 ntBASIC5.11□□□□□ -1.59
CCL1P22362 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCL1P22362 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL1P22362 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCL1P22362 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL1P22362 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL1P22362 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCL1P22362 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CCL1P22362 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCL1P22362 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCL1P22362 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCL1P22362 FBXL21-201ENST00000297158 1305 ntBASIC5.1□□□□□ -1.59
CCL1P22362 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCL1P22362 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL1P22362 RN7SKP78-201ENST00000364711 318 ntBASIC5.1□□□□□ -1.59
CCL1P22362 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL1P22362 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL1P22362 Z82198.3-201ENST00000421145 199 ntBASIC5.1□□□□□ -1.59
CCL1P22362 KIF4CP-201ENST00000422742 1279 ntBASIC5.1□□□□□ -1.59
CCL1P22362 AC023141.3-201ENST00000436698 278 ntBASIC5.1□□□□□ -1.59
CCL1P22362 RPL12P49-201ENST00000441100 121 ntBASIC5.1□□□□□ -1.59
CCL1P22362 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.1□□□□□ -1.59
CCL1P22362 AL356121.1-201ENST00000442911 156 ntBASIC5.1□□□□□ -1.59
CCL1P22362 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL1P22362 AC010240.2-201ENST00000445363 1205 ntBASIC5.1□□□□□ -1.59
CCL1P22362 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL1P22362 CEACAMP11-201ENST00000455211 583 ntBASIC5.1□□□□□ -1.59
CCL1P22362 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.1□□□□□ -1.59
CCL1P22362 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL1P22362 AC092865.4-201ENST00000477936 615 ntBASIC5.1□□□□□ -1.59
CCL1P22362 RN7SL362P-201ENST00000494228 267 ntBASIC5.1□□□□□ -1.59
CCL1P22362 RN7SL284P-201ENST00000498823 275 ntBASIC5.1□□□□□ -1.59
CCL1P22362 AC008629.2-201ENST00000503783 483 ntBASIC5.1□□□□□ -1.59
CCL1P22362 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL1P22362 CASP1P2-201ENST00000526830 1258 ntBASIC5.1□□□□□ -1.59
CCL1P22362 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.1□□□□□ -1.59
CCL1P22362 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCL1P22362 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCL1P22362 MRPS21P8-201ENST00000569196 235 ntBASIC5.1□□□□□ -1.59
CCL1P22362 AC004232.2-201ENST00000574245 821 ntBASIC5.1□□□□□ -1.59
CCL1P22362 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL1P22362 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.1□□□□□ -1.59
CCL1P22362 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL1P22362 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms