Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 WBP1LP3-201ENST00000523033 208 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 MIR4760-201ENST00000585040 80 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 MIR6809-201ENST00000612189 116 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 AC023510.2-201ENST00000622162 746 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 AC091305.2-201ENST00000624049 1576 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 AC022905.1-201ENST00000503430 3048 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 GNL2P1-201ENST00000451274 2190 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC119674.1-213ENST00000641177 1386 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC005618.1-201ENST00000606901 3148 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 RBPJP7-201ENST00000442803 1447 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 RBPJP5-201ENST00000449433 1447 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-DOAP06340 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-DOAP06340 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 RNA5SP375-201ENST00000362975 119 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AL031985.1-201ENST00000392713 418 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 RN7SKP199-201ENST00000410325 305 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 RPS15AP30-201ENST00000420976 390 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC104843.2-201ENST00000427666 297 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AL590762.3-201ENST00000436372 640 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 TUBB4BP6-201ENST00000437576 479 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 PPIAP20-201ENST00000449839 135 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC007998.1-201ENST00000474156 672 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC114728.1-201ENST00000488289 483 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 SNORD46.2-201ENST00000516021 102 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC022826.1-201ENST00000519383 805 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 OR56A7P-201ENST00000524865 941 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AP005639.1-201ENST00000526939 192 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-DOAP06340 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AL731537.2-201ENST00000561565 951 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC027243.2-201ENST00000602530 724 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AP003117.1-201ENST00000602771 554 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC005229.3-201ENST00000603438 323 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AL139022.2-201ENST00000606934 443 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 MIR6862-1-201ENST00000613016 70 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 MIR6862-2-201ENST00000614755 70 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC096861.1-201ENST00000616652 240 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 TCL6_3.1-201ENST00000619064 137 ntBASIC7.22□□□□□ -1.25
HLA-DOAP06340 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-DOAP06340 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-DOAP06340 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.22□□□□□ -1.25
HLA-DOAP06340 HDAC1P2-201ENST00000453661 1398 ntBASIC7.21□□□□□ -1.25
HLA-DOAP06340 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-DOAP06340 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-DOAP06340 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-DOAP06340 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-DOAP06340 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-DOAP06340 KARSP1-201ENST00000451871 1752 ntBASIC7.21□□□□□ -1.25
HLA-DOAP06340 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
HLA-DOAP06340 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-DOAP06340 TMSB4XP2-201ENST00000335179 210 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 RNU105B-201ENST00000364478 208 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 RNA5SP284-201ENST00000384547 118 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 BX284632.2-201ENST00000421091 399 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 GAPDHP75-201ENST00000433910 943 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 NDUFS5P5-201ENST00000437256 321 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 VN1R110P-201ENST00000438988 971 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 SCAND3P1-201ENST00000439854 1060 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms