Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC016542.2-201ENST00000624201 619 ntBASIC5.07□□□□□ -1.6
CD74P04233 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CD74P04233 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CD74P04233 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 MAPK10-338ENST00000641647 3362 ntBASIC5.07□□□□□ -1.6
CD74P04233 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.07□□□□□ -1.6
CD74P04233 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CD74P04233 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.07□□□□□ -1.6
CD74P04233 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 AC125336.1-201ENST00000508893 2827 ntBASIC5.06□□□□□ -1.6
CD74P04233 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CD74P04233 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CD74P04233 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CD74P04233 CRIP1P1-201ENST00000427567 185 ntBASIC5.06□□□□□ -1.6
CD74P04233 AC242426.1-201ENST00000435270 960 ntBASIC5.06□□□□□ -1.6
CD74P04233 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.06□□□□□ -1.6
CD74P04233 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CD74P04233 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 SOCS5P1-201ENST00000440415 949 ntBASIC5.06□□□□□ -1.6
CD74P04233 GTF2IP14-201ENST00000441415 586 ntBASIC5.06□□□□□ -1.6
CD74P04233 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 RPS23P9-201ENST00000448848 438 ntBASIC5.06□□□□□ -1.6
CD74P04233 SDC4P-201ENST00000453285 601 ntBASIC5.06□□□□□ -1.6
CD74P04233 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.06□□□□□ -1.6
CD74P04233 AC090589.1-201ENST00000473109 362 ntBASIC5.06□□□□□ -1.6
CD74P04233 AC005017.1-201ENST00000482002 490 ntBASIC5.06□□□□□ -1.6
CD74P04233 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 SUMO2P4-201ENST00000504193 276 ntBASIC5.06□□□□□ -1.6
CD74P04233 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 KHDC1P1-201ENST00000511053 508 ntBASIC5.06□□□□□ -1.6
CD74P04233 AC093816.1-201ENST00000515076 913 ntBASIC5.06□□□□□ -1.6
CD74P04233 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.06□□□□□ -1.6
CD74P04233 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.06□□□□□ -1.6
CD74P04233 OR4A43P-201ENST00000532938 908 ntBASIC5.06□□□□□ -1.6
CD74P04233 AC090424.1-201ENST00000535243 736 ntBASIC5.06□□□□□ -1.6
CD74P04233 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.06□□□□□ -1.6
CD74P04233 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.06□□□□□ -1.6
CD74P04233 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.06□□□□□ -1.6
CD74P04233 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.06□□□□□ -1.6
CD74P04233 AC027216.1-201ENST00000577726 685 ntBASIC5.06□□□□□ -1.6
CD74P04233 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.06□□□□□ -1.6
CD74P04233 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 AL591222.2-201ENST00000604443 754 ntBASIC5.06□□□□□ -1.6
CD74P04233 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.06□□□□□ -1.6
CD74P04233 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.06□□□□□ -1.6
CD74P04233 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD74P04233 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CD74P04233 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 AC010401.2-201ENST00000575137 4934 ntBASIC5.05□□□□□ -1.6
CD74P04233 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 AL133243.2-201ENST00000610331 1621 ntBASIC5.05□□□□□ -1.6
CD74P04233 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CD74P04233 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 RNU105B-201ENST00000364478 208 ntBASIC5.05□□□□□ -1.6
CD74P04233 RN7SKP69-201ENST00000365390 305 ntBASIC5.05□□□□□ -1.6
CD74P04233 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CD74P04233 RNA5SP187-201ENST00000384400 119 ntBASIC5.05□□□□□ -1.6
CD74P04233 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 RPL21P50-201ENST00000417698 477 ntBASIC5.05□□□□□ -1.6
CD74P04233 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 RPS15AP30-201ENST00000420976 390 ntBASIC5.05□□□□□ -1.6
CD74P04233 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 AL845321.1-201ENST00000444603 348 ntBASIC5.05□□□□□ -1.6
CD74P04233 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.05□□□□□ -1.6
CD74P04233 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.05□□□□□ -1.6
CD74P04233 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 OR4D12P-201ENST00000509361 911 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms