Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC027026.1-201ENST00000532323 742 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC036176.3-201ENST00000602456 418 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AL118556.2-201ENST00000614375 824 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 MTCO1P8-201ENST00000416914 1523 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLPTM1O96005 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.77□□□□□ -1.49
CLPTM1O96005 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CLPTM1O96005 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AP001541.1-201ENST00000623322 1904 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 FANCD2P2-201ENST00000437591 1400 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.76□□□□□ -1.49
CLPTM1O96005 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLPTM1O96005 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLPTM1O96005 RNA5SP155-201ENST00000411154 129 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 AL445213.1-201ENST00000412589 747 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 METTL15P3-201ENST00000415522 1221 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 AC234771.4-201ENST00000441416 730 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.76□□□□□ -1.49
CLPTM1O96005 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.76□□□□□ -1.49
CLPTM1O96005 RPL26P30-201ENST00000453533 435 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 AC090589.1-201ENST00000473109 362 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 AC022206.1-201ENST00000495947 347 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 TOMM22P4-201ENST00000511318 336 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 MINOS1P4-201ENST00000515470 318 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.76□□□□□ -1.49
CLPTM1O96005 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.76□□□□□ -1.49
CLPTM1O96005 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.76□□□□□ -1.49
CLPTM1O96005 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AL445383.1-201ENST00000554689 874 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AC007342.5-201ENST00000571340 2142 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.76□□□□□ -1.49
CLPTM1O96005 MIR6885-201ENST00000612241 66 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 AP005212.4-201ENST00000614206 710 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AC099654.15-201ENST00000639802 509 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CLPTM1O96005 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 HDAC1P2-201ENST00000453661 1398 ntBASIC5.76□□□□□ -1.49
CLPTM1O96005 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.76□□□□□ -1.49
CLPTM1O96005 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.76□□□□□ -1.49
CLPTM1O96005 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.76□□□□□ -1.49
CLPTM1O96005 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLPTM1O96005 AP001029.2-203ENST00000589795 4910 ntBASIC5.75□□□□□ -1.49
CLPTM1O96005 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLPTM1O96005 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.75□□□□□ -1.49
CLPTM1O96005 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CLPTM1O96005 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CLPTM1O96005 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.75□□□□□ -1.49
CLPTM1O96005 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLPTM1O96005 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
CLPTM1O96005 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLPTM1O96005 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.75□□□□□ -1.49
CLPTM1O96005 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CLPTM1O96005 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLPTM1O96005 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLPTM1O96005 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.75□□□□□ -1.49
CLPTM1O96005 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CLPTM1O96005 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.75□□□□□ -1.49
CLPTM1O96005 RPL23AP85-201ENST00000421838 433 ntBASIC5.75□□□□□ -1.49
CLPTM1O96005 AL596268.1-201ENST00000427910 1048 ntBASIC5.75□□□□□ -1.49
CLPTM1O96005 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.75□□□□□ -1.49
CLPTM1O96005 FTLP19-201ENST00000433300 394 ntBASIC5.75□□□□□ -1.49
CLPTM1O96005 AC073072.2-201ENST00000447425 348 ntBASIC5.75□□□□□ -1.49
CLPTM1O96005 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.75□□□□□ -1.49
CLPTM1O96005 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms