Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 AC004076.2-201ENST00000620532 3323 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PDLIM1O00151 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PDLIM1O00151 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 MIR433-201ENST00000384837 93 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 NACAP7-201ENST00000407371 609 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 AL929472.1-201ENST00000417484 429 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 AL596268.1-201ENST00000427910 1048 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 VN1R53P-201ENST00000429536 957 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM1O00151 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM1O00151 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.87□□□□□ -1.47
PDLIM1O00151 AL445991.1-201ENST00000450381 475 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 AL034369.1-201ENST00000453808 477 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 RN7SL502P-201ENST00000481857 290 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 NACAP5-201ENST00000509863 636 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.87□□□□□ -1.47
PDLIM1O00151 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM1O00151 OR7E158P-201ENST00000524483 910 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM1O00151 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM1O00151 SETP1-201ENST00000556014 845 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM1O00151 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM1O00151 AC090616.1-201ENST00000583895 447 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM1O00151 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.87□□□□□ -1.47
PDLIM1O00151 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM1O00151 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM1O00151 AL139407.1-201ENST00000613826 1175 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 AC003992.1-201ENST00000635364 557 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM1O00151 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM1O00151 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PDLIM1O00151 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 PCAT14-202ENST00000627127 3935 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 PSMC1P4-201ENST00000515236 1327 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PDLIM1O00151 DNM1P47-203ENST00000571780 12667 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 AL353796.1-201ENST00000561542 3241 ntBASIC5.87□□□□□ -1.47
PDLIM1O00151 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM1O00151 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PDLIM1O00151 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
PDLIM1O00151 RBPJP6-201ENST00000411556 1431 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM1O00151 HDAC1P2-201ENST00000453661 1398 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 CCNT2P1-201ENST00000423082 1315 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM1O00151 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 PPIAP24-201ENST00000328558 471 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PDLIM1O00151 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM1O00151 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PDLIM1O00151 SNORD1C-201ENST00000363315 78 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM1O00151 SNORA7A-201ENST00000384765 139 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 RNA5SP155-201ENST00000411154 129 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM1O00151 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM1O00151 SNRPCP11-201ENST00000492453 205 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 RN7SL612P-201ENST00000497704 295 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 AC111000.5-201ENST00000506559 1178 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 SCARNA5-201ENST00000516201 276 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM1O00151 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 RN7SL208P-201ENST00000577964 296 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 MIR3157-201ENST00000578688 85 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.86□□□□□ -1.47
PDLIM1O00151 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM1O00151 AC008507.3-201ENST00000585753 472 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 AC092944.2-201ENST00000605443 889 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 HTR1DP1-201ENST00000616500 888 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM1O00151 AC010809.3-201ENST00000621310 641 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 CLUHP10-201ENST00000631979 980 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.86□□□□□ -1.47
PDLIM1O00151 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM1O00151 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM1O00151 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM1O00151 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM1O00151 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM1O00151 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms