Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPL23AP64-201ENST00000469465 435 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 RPL23AP37-201ENST00000479658 549 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 OR9A1P-202ENST00000484361 945 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SL434P-201ENST00000495872 271 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 HNRNPA1P17-201ENST00000496620 924 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC021146.11-201ENST00000503319 491 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 RNA5SP518-201ENST00000515957 119 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SKP288-201ENST00000516227 268 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 RNA5SP318-201ENST00000516352 92 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC134698.5-201ENST00000519444 336 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC100854.1-201ENST00000520351 341 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 COX6CP11-201ENST00000555293 229 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AL121579.2-201ENST00000555466 590 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC011270.1-201ENST00000558606 583 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 ZRANB2-AS2-206ENST00000583678 551 ntTSL 4 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AL356052.1-201ENST00000605764 376 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AL731533.2-201ENST00000607898 578 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AL008723.3-201ENST00000608926 449 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC007378.1-201ENST00000609765 478 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 MIR6761-201ENST00000617899 72 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 BX005195.1-201ENST00000618097 1198 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 CENPP-204ENST00000618653 570 ntTSL 2 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AL662791.5-201ENST00000623334 466 ntTSL 3 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC016542.3-201ENST00000623520 619 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AL662791.5-202ENST00000623946 461 ntTSL 2 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 EEF1A1P21-201ENST00000512363 1344 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 TLK1P1-201ENST00000456760 2440 ntBASIC3.17□□□□□ -1.9
CHKB-CPT1BH3BT56 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 THAP12P9-201ENST00000503971 2360 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 OR4L1-201ENST00000315683 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 RNA5SP280-201ENST00000411230 115 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 RPL12P10-201ENST00000413498 498 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 PCNPP4-201ENST00000414817 517 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 CYCSP10-201ENST00000417973 294 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC074033.1-201ENST00000418623 410 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC013470.3-201ENST00000420252 1194 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 RPL23AP85-201ENST00000421838 433 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 HSPD1P12-201ENST00000429127 1069 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC108039.2-201ENST00000440214 359 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 CD46P1-201ENST00000441364 763 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 EFCAB14P1-201ENST00000442409 463 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC073109.1-201ENST00000445066 978 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 PTMAP3-201ENST00000447474 330 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 OR11Q1P-201ENST00000451582 877 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC099670.1-201ENST00000455141 783 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 OR7E7P-201ENST00000455678 1012 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 RANP2-201ENST00000456833 229 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 RPL7P17-201ENST00000470927 724 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SL152P-201ENST00000484176 298 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC011411.1-201ENST00000509592 876 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms