Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC087516.1-201ENST00000561236 2428 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 RN7SKP146-201ENST00000410242 334 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC099782.1-201ENST00000425889 474 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 RPS12P17-201ENST00000438591 377 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 FRG2FP-204ENST00000453982 852 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 RPL12P39-201ENST00000455456 496 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC113367.2-201ENST00000505749 160 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC108103.1-201ENST00000511286 446 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 MIR2117-201ENST00000516780 80 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC116917.1-201ENST00000520558 305 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC110056.1-201ENST00000525759 911 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC090826.1-203ENST00000569235 490 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 PCA3_2.1-201ENST00000612507 409 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AC099654.15-201ENST00000639802 509 ntBASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAV27A0A087WT01 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRAV27A0A087WT01 AC004656.1-201ENST00000568479 4951 ntBASIC5.34□□□□□ -1.56
TRAV27A0A087WT01 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC004076.2-201ENST00000620532 3323 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 U3.10-201ENST00000364459 214 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 MIR191-201ENST00000384873 92 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 YWHAZP6-201ENST00000399764 738 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 Z82198.3-201ENST00000421145 199 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC108479.1-201ENST00000431142 427 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AL445928.1-201ENST00000435545 222 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 GAPDHP59-201ENST00000435908 267 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 TRIM60P16-201ENST00000444048 694 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 CEACAMP11-201ENST00000455211 583 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC106822.1-201ENST00000502647 526 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 OR7E99P-201ENST00000505750 922 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 GARSP1-201ENST00000570895 719 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms