Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SNORA43.1-201ENST00000364863 140 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 SNORA5C-201ENST00000364902 137 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RNU1-16P-201ENST00000365477 164 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RPL5P20-201ENST00000403848 896 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AL627402.1-201ENST00000405276 735 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AL033519.1-201ENST00000407266 307 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AL139039.2-201ENST00000407436 479 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AL929472.1-201ENST00000417484 429 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AL355334.1-201ENST00000417713 215 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 TRGV5P-201ENST00000419915 354 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 GAPDHP49-201ENST00000421421 961 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AL139184.1-202ENST00000422303 222 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC130472.1-201ENST00000427885 309 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PRPS1P2-201ENST00000430496 937 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RPL22P11-201ENST00000434894 385 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 FDPSP8-201ENST00000438304 1089 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 TMBIM1-215ENST00000445635 1251 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PGM5P4-AS1-203ENST00000446595 739 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 MORF4-201ENST00000447135 971 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RPS18P1-201ENST00000447840 458 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LDHAP3-201ENST00000448312 1008 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RPE-214ENST00000452025 779 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 MEMO1P4-201ENST00000453590 386 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 OR7E62P-201ENST00000456741 477 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AP001464.1-201ENST00000457565 323 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 WBP1LP1-201ENST00000460451 896 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RPL5P30-201ENST00000465511 891 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RN7SL12P-201ENST00000473849 290 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AP002884.1-201ENST00000479691 655 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC006539.1-201ENST00000481419 501 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RN7SL211P-201ENST00000485246 276 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PPM1AP1-201ENST00000502740 1135 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 OR52H2P-201ENST00000514607 902 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 OR10J2P-201ENST00000514684 961 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RPS20-204ENST00000519606 424 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RAB30-209ENST00000532548 644 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC140063.1-201ENST00000541343 259 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PDCD5P1-201ENST00000543528 309 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC087863.1-201ENST00000544515 570 ntTSL 4 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 GABARAPL1-214ENST00000545047 559 ntTSL 4 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC137627.1-201ENST00000545761 289 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 NUTF2P6-201ENST00000560892 385 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC005632.2-201ENST00000564271 828 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC067796.1-201ENST00000586795 496 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 DYNLL1P1-201ENST00000595442 269 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC068888.1-205ENST00000607643 662 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC138627.1-204ENST00000641894 765 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC087190.4-201ENST00000574616 8334 ntBASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms