Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CDC27P1-201ENST00000445384 715 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 SRP68P2-201ENST00000456184 254 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 GLRXP3-201ENST00000470810 321 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC079594.1-201ENST00000489757 331 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 RN7SL649P-201ENST00000496974 275 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC010285.3-201ENST00000511668 676 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 RNU6-718P-201ENST00000516166 105 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 Y_RNA.695-201ENST00000516715 107 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 RPS20-202ENST00000518875 671 ntTSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC010653.1-201ENST00000571108 881 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC090578.1-201ENST00000604955 591 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC106900.2-201ENST00000604994 317 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 NQO2-209ENST00000606474 470 ntTSL 3 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC013476.2-201ENST00000614456 459 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC009509.4-201ENST00000619202 509 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AP005264.7-201ENST00000625003 745 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC006026.1-201ENST00000444025 1803 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 PAH-201ENST00000307000 2466 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 RNU4-81P-201ENST00000363561 144 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 MIR575-201ENST00000385013 94 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 DEFB108C-201ENST00000400154 252 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 EEF1GP6-201ENST00000402309 905 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC009310.1-201ENST00000414414 451 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 Z82198.3-201ENST00000421145 199 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 KRTAP3-4P-201ENST00000430780 280 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC005040.1-201ENST00000437783 482 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 GAPDHP36-201ENST00000480688 918 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC079140.3-201ENST00000511111 550 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC107952.1-201ENST00000524200 376 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 OR7E158P-201ENST00000524483 910 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC022690.1-201ENST00000526681 550 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 EIF5A2P1-201ENST00000564027 460 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC138749.2-201ENST00000566048 167 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 RPS7P1-201ENST00000571702 585 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC005730.3-201ENST00000583067 366 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC069366.1-201ENST00000583159 838 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC020915.5-201ENST00000596836 964 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 RBM12B-AS1-201ENST00000623283 653 ntBASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms