Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 YWHAZP6-201ENST00000399764 738 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 THEM7P-201ENST00000419556 672 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC021876.1-201ENST00000425959 359 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC099677.3-201ENST00000427081 395 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 PPIAP7-201ENST00000454070 489 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 snoU13.29-201ENST00000459370 104 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 RN7SL254P-201ENST00000460609 284 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 PFN1P6-201ENST00000476786 399 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC110056.1-201ENST00000525759 911 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AP000620.1-201ENST00000527147 504 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 OR4A42P-201ENST00000531397 938 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 OR4A41P-201ENST00000533053 928 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 BTG1P1-201ENST00000540396 508 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC006115.2-201ENST00000596823 202 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC011500.1-201ENST00000601963 469 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 FAM27E2-201ENST00000619668 403 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AL109924.4-201ENST00000623089 670 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AL357140.4-201ENST00000636827 412 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AC099654.15-201ENST00000639802 509 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
VPS29Q9UBQ0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VPS29Q9UBQ0 ZNF969P-201ENST00000510345 2341 ntBASIC5.71□□□□□ -1.49
VPS29Q9UBQ0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.71□□□□□ -1.49
VPS29Q9UBQ0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.71□□□□□ -1.49
VPS29Q9UBQ0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
VPS29Q9UBQ0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VPS29Q9UBQ0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
VPS29Q9UBQ0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 RN7SKP250-201ENST00000363924 321 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 RNA5SP211-201ENST00000365516 117 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 RNU6-316P-201ENST00000391027 107 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 SNRPEP6-201ENST00000407465 277 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 HMGB1P7-201ENST00000450921 612 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC079080.1-201ENST00000479841 822 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 OR7E99P-201ENST00000505750 922 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 OR7E158P-201ENST00000524483 910 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC121758.1-202ENST00000556917 658 ntBASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS29Q9UBQ0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms