Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.99□□□□□ -1.29
HDAC6Q9UBN7 SAMMSON-210ENST00000641260 1308 ntBASIC6.99□□□□□ -1.29
HDAC6Q9UBN7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 BX284613.1-201ENST00000452221 1641 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 OR11H13P-201ENST00000359695 979 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 RNA5SP514-201ENST00000363717 111 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AL451046.1-201ENST00000406097 534 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 TMA16P2-201ENST00000413187 601 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC130360.1-201ENST00000425489 1117 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 PRMT5P1-201ENST00000514351 598 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC130365.2-201ENST00000525882 1201 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC022106.1-201ENST00000612834 766 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC009120.7-201ENST00000623452 780 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC129778.1-202ENST00000623812 261 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AL591379.1-207ENST00000635982 261 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AC010329.1-201ENST00000593903 8328 ntBASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC6Q9UBN7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 SNORA21-201ENST00000362423 132 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 RNA5SP477-201ENST00000362639 119 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 RN7SKP69-201ENST00000365390 305 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AL031985.1-201ENST00000392713 418 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 RN7SKP206-201ENST00000410823 293 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC002553.3-201ENST00000453002 341 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 RN7SL101P-201ENST00000496350 279 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC106800.3-201ENST00000511389 308 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 MTATP6P1-201ENST00000514057 681 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 IGKV1D-22-201ENST00000518953 324 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AP003080.1-202ENST00000526526 915 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC068305.2-201ENST00000550567 1205 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AL008723.3-201ENST00000608926 449 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AL157762.1-201ENST00000619612 415 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 MIR4302-201ENST00000638058 60 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 CASC19-238ENST00000641523 1558 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 AC138627.1-204ENST00000641894 765 ntBASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC6Q9UBN7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HDAC6Q9UBN7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HDAC6Q9UBN7 AP000432.2-201ENST00000624164 2048 ntBASIC6.96□□□□□ -1.29
HDAC6Q9UBN7 AC011455.2-201ENST00000599320 3336 ntBASIC6.96□□□□□ -1.29
HDAC6Q9UBN7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HDAC6Q9UBN7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms