Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 Y_RNA.62-201ENST00000362840 99 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 LCN1P2-201ENST00000372030 223 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 SNORA70H-201ENST00000383910 135 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 SNORA70J-201ENST00000384182 135 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 GABARAPL3-201ENST00000412799 354 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 RPS17P17-201ENST00000419392 409 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC007064.3-201ENST00000422608 359 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 NPM1P25-201ENST00000429734 854 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 SDR42E1P3-201ENST00000438345 502 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC097463.1-201ENST00000447288 481 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 OR52Y1P-201ENST00000452418 828 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AL356390.1-201ENST00000455684 397 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 FTH1P8-201ENST00000498161 514 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC112184.1-201ENST00000505179 312 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 CR383658.1-201ENST00000514609 734 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC009879.1-201ENST00000520029 839 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 RNU4ATAC-201ENST00000580972 127 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC096586.2-201ENST00000610260 441 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC097641.3-201ENST00000613523 464 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 RFPL4AP6-201ENST00000616792 846 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AL512652.1-201ENST00000619006 500 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 FAM27E2-201ENST00000619668 403 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC024587.1-201ENST00000505925 2157 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC009135.2-201ENST00000624136 1768 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 AC024341.1-201ENST00000526444 1552 ntBASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.31□□□□□ -1.4
TMEM248Q9NWD8 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 HSPD1P9-201ENST00000420325 1636 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 RNA5SP431-201ENST00000410312 120 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 RPL35AP31-201ENST00000418340 337 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 SEPT14P12-201ENST00000442280 560 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AL512593.1-201ENST00000444758 779 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AC112187.1-201ENST00000455837 479 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 RN7SL168P-201ENST00000463821 279 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 RPL5P12-201ENST00000477071 851 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AC007346.1-201ENST00000569208 867 ntBASIC6.3□□□□□ -1.4
TMEM248Q9NWD8 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms