Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
AMBRA1Q9C0C7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
AMBRA1Q9C0C7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
AMBRA1Q9C0C7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
AMBRA1Q9C0C7 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
AMBRA1Q9C0C7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
AMBRA1Q9C0C7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
AMBRA1Q9C0C7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
AMBRA1Q9C0C7 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 RN7SKP237-201ENST00000364663 301 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 RN7SKP187-201ENST00000365536 330 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL360271.1-201ENST00000395679 510 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL136100.1-201ENST00000407696 330 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL023284.3-201ENST00000407767 334 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 FAM183DP-201ENST00000421987 399 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL672212.1-201ENST00000422246 400 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 PTP4A1P3-201ENST00000433661 420 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ELOCP13-201ENST00000443934 329 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 MGAT2P1-201ENST00000449718 797 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC022080.2-201ENST00000452932 533 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC104164.3-201ENST00000467363 1258 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 RPL23AP64-201ENST00000469465 435 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC016550.3-201ENST00000515706 767 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 RNU5A-7P-201ENST00000515979 116 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC125612.1-201ENST00000547580 377 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC069240.2-201ENST00000550242 609 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AP003115.1-201ENST00000569849 463 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC005242.1-201ENST00000585658 438 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 BUB1P1-201ENST00000603541 607 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 OR51C1P-201ENST00000608504 942 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC087683.2-201ENST00000611384 326 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC008759.3-201ENST00000613300 508 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL138960.1-201ENST00000613838 513 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC084824.4-201ENST00000620106 731 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AC007275.1-201ENST00000621243 671 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 AL078595.3-201ENST00000623815 1166 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 MAPK10-261ENST00000641050 3109 ntBASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.11□□□□□ -1.43
AMBRA1Q9C0C7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms