Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC090115.2-201ENST00000548060 883 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC136619.2-201ENST00000563361 631 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC027104.1-201ENST00000563702 681 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 ULK4P2-202ENST00000564187 492 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AL512347.1-201ENST00000566420 503 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC126323.4-201ENST00000566935 234 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 MIR548S-201ENST00000581352 82 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC073333.2-201ENST00000603589 769 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC106791.2-201ENST00000604680 391 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AL078624.2-201ENST00000605063 554 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC108747.1-201ENST00000609508 535 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AP000255.1-201ENST00000610276 676 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 MIR8082-201ENST00000612488 81 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC025253.1-201ENST00000613623 543 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AL359513.1-201ENST00000614364 557 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC116165.3-201ENST00000614524 400 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC099654.10-201ENST00000640395 161 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 CASC19-274ENST00000642018 970 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 DYNC1I2P1-201ENST00000435916 1838 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AL445250.1-203ENST00000641829 1535 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC068733.2-201ENST00000605434 1418 ntBASIC5.99□□□□□ -1.45
SSBP3Q9BWW4 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 NCLP2-201ENST00000416078 1462 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AC011379.1-201ENST00000508713 3025 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 RNU6-553P-201ENST00000364047 96 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 Y_RNA.578-201ENST00000390903 88 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 TAF9BP2-201ENST00000400856 499 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL139100.1-201ENST00000408001 498 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AC068138.1-201ENST00000412635 217 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL445183.3-201ENST00000414168 502 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 MEAF6P1-201ENST00000416092 327 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AC008173.1-201ENST00000418901 264 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 PPIAP23-201ENST00000420099 497 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AC246680.2-201ENST00000422106 389 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 FABP5P1-201ENST00000423401 411 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 MTCO2P19-201ENST00000427513 598 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AC244035.1-201ENST00000430042 390 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 MTCO1P45-201ENST00000431457 267 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 GAS5-211ENST00000432536 959 ntTSL 2 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 RPL5P4-201ENST00000434805 886 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 RPS24P1-201ENST00000438550 371 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AC098614.3-201ENST00000438957 440 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 RPS19P6-201ENST00000441327 433 ntBASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.98□□□□□ -1.45
SSBP3Q9BWW4 EIF3LP2-201ENST00000457262 807 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms