Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 HMGN1P17-201ENST00000513734 295 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 SNORA20.3-201ENST00000516880 132 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 OR7E154P-201ENST00000525174 932 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AP003392.2-201ENST00000527269 208 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 MIR4800-201ENST00000537353 80 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC126177.6-201ENST00000550420 1009 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 NMNAT1P5-201ENST00000559657 841 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 EIF4A2P1-201ENST00000587313 1063 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC128687.1-201ENST00000605304 619 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AL645933.2-201ENST00000606743 1207 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC084036.1-201ENST00000609190 508 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 LRRC77P-213ENST00000637727 880 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 ZNF833P-201ENST00000424938 1494 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC127024.8-201ENST00000623719 2094 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 COL6A4P1-202ENST00000487147 4317 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 RNU6-386P-201ENST00000362650 107 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 MT-TD-201ENST00000387419 68 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 RPS3AP5-201ENST00000389400 821 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 VDAC2P1-201ENST00000399358 958 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 EEF1GP6-201ENST00000402309 905 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 MIR1302-11-201ENST00000408051 138 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 MIR1302-9-201ENST00000408365 138 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 MIR1302-10-201ENST00000408734 138 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AL355862.1-201ENST00000412705 353 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC009237.5-201ENST00000414271 501 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AP003385.1-201ENST00000426387 893 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC002069.1-201ENST00000429649 1159 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC068491.1-201ENST00000449539 1241 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 C1DP3-201ENST00000455013 423 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC236972.4-201ENST00000458091 963 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC107015.1-201ENST00000466902 747 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 SETP6-201ENST00000479329 568 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC021006.1-201ENST00000489849 553 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 FAM92A1P2-202ENST00000504766 877 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC114967.1-201ENST00000504890 259 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC004069.2-201ENST00000505438 1114 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC095052.1-201ENST00000509955 863 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC138517.1-201ENST00000515724 568 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 SNX18P27-201ENST00000523611 779 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC089984.3-201ENST00000552838 363 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 ZNF519P2-201ENST00000557032 169 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 MIR1302-2-201ENST00000607096 138 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 AC131902.3-201ENST00000611767 581 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms