Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RN7SL369P-201ENST00000477138 299 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 RN7SL714P-201ENST00000487050 298 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC095052.1-201ENST00000509955 863 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 RNU6-362P-201ENST00000516736 90 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 NATP-201ENST00000523491 878 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF4Q92544 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 CYCSP38-201ENST00000559840 322 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC092332.1-201ENST00000563684 829 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC092266.1-201ENST00000610958 165 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 AL352984.2-202ENST00000613699 155 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 AL138960.1-201ENST00000613838 513 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 EIF3EP1-201ENST00000433978 1316 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF4Q92544 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF4Q92544 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF4Q92544 AC119674.1-213ENST00000641177 1386 ntBASIC5.89□□□□□ -1.47
TM9SF4Q92544 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF4Q92544 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF4Q92544 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TM9SF4Q92544 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC093297.3-201ENST00000607056 2517 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 RNA5SP350-201ENST00000363298 111 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 AL050335.1-201ENST00000396909 869 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 RPS17P17-201ENST00000419392 409 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC006455.6-201ENST00000426192 893 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC012497.1-201ENST00000429392 575 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 RPS29P14-201ENST00000431518 171 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC112492.2-201ENST00000432774 1030 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 MED28P4-201ENST00000433137 572 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 UBE2V2P3-201ENST00000433562 437 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 PPIAP27-201ENST00000453800 265 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 OR2AF1P-201ENST00000454899 889 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC098847.1-201ENST00000473094 348 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 IGLVIV-64-201ENST00000518581 301 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 TPRX1P1-201ENST00000557620 319 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AP001264.1-201ENST00000620602 703 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AP003072.5-201ENST00000623872 773 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 MIR4302-201ENST00000638058 60 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 OR7E91P-202ENST00000642062 1198 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF4Q92544 AC011369.2-201ENST00000624423 1567 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 AL353763.1-201ENST00000624467 1628 ntBASIC5.88□□□□□ -1.47
TM9SF4Q92544 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TM9SF4Q92544 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TM9SF4Q92544 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF4Q92544 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
TM9SF4Q92544 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF4Q92544 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF4Q92544 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.87□□□□□ -1.47
TM9SF4Q92544 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.87□□□□□ -1.47
TM9SF4Q92544 CYCSP52-201ENST00000422857 310 ntBASIC5.87□□□□□ -1.47
TM9SF4Q92544 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms