Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC119674.1-202ENST00000641333 1860 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 PRELID1P1-201ENST00000403549 660 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 SNORA77.2-201ENST00000408571 112 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 PSMD10P2-201ENST00000432890 672 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 RPS3AP38-201ENST00000435889 763 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC013403.1-201ENST00000436954 263 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AL162739.1-201ENST00000450606 307 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 RPS4XP17-201ENST00000479057 754 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC117500.1-201ENST00000497352 755 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC093815.1-201ENST00000508637 280 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 KHDC1P1-201ENST00000511053 508 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 AC016542.2-201ENST00000624201 619 ntBASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLHC1Q8NHS4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 RN7SKP144-201ENST00000411108 279 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 PTCD2P2-201ENST00000415579 1095 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AL645936.1-201ENST00000441979 518 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AL445991.1-201ENST00000450381 475 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC138409.2-202ENST00000507274 458 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC021269.1-201ENST00000526860 705 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC005632.2-201ENST00000564271 828 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 CCDC58P1-201ENST00000578567 430 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 MAPK10-350ENST00000641777 965 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC007842.1-201ENST00000597336 2039 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 190.4 ms