Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 METTL15P3-201ENST00000415522 1221 ntBASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AC010086.1-201ENST00000437359 1052 ntBASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 CUBNP2-201ENST00000443534 1139 ntBASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AC099670.1-201ENST00000455141 783 ntBASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AC093870.1-201ENST00000506837 213 ntBASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 SYPL1P2-201ENST00000582878 727 ntBASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AC005514.1-201ENST00000623521 208 ntBASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AC018765.1-201ENST00000623357 3446 ntBASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC112Q8NEF3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC010894.1-201ENST00000313760 361 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 MTND2P40-201ENST00000436718 841 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 E2F6P3-201ENST00000441743 743 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 GAPDHP23-201ENST00000444823 993 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 PDCL3P4-201ENST00000489621 720 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC092865.1-201ENST00000544395 1023 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 ZNF322P1-201ENST00000568013 1209 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC019322.1-201ENST00000571869 389 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 RN7SL475P-201ENST00000583379 298 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC002069.2-201ENST00000603580 883 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AL355974.3-201ENST00000617383 467 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 MIR6849-201ENST00000618543 69 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AC068213.1-201ENST00000625124 226 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 AL596275.2-207ENST00000641188 675 ntBASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC112Q8NEF3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.65□□□□□ -1.35
CCDC112Q8NEF3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC112Q8NEF3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC112Q8NEF3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.65□□□□□ -1.35
CCDC112Q8NEF3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms