Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SMC1BQ8NDV3 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SMC1BQ8NDV3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SMC1BQ8NDV3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SMC1BQ8NDV3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.67□□□□□ -1.18
SMC1BQ8NDV3 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.67□□□□□ -1.18
SMC1BQ8NDV3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SMC1BQ8NDV3 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SMC1BQ8NDV3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 RPL5P5-201ENST00000392009 893 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC245060.4-201ENST00000413293 1121 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 NPM1P4-201ENST00000414095 812 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 RPA2P2-201ENST00000419698 796 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC013268.2-201ENST00000420753 337 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 RPL5P9-201ENST00000448118 886 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 MTND2P25-201ENST00000449028 610 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 TRBV8-1-201ENST00000481590 279 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 RN7SL382P-201ENST00000482631 282 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 RN7SL466P-201ENST00000497546 295 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 OR4D12P-201ENST00000509361 911 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC104695.2-201ENST00000605056 775 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AC073111.2-201ENST00000605657 1075 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 TSHZ2-205ENST00000626626 670 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 SAMMSON-227ENST00000642114 1199 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 MTND4P9-201ENST00000507819 1346 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 OR52B5P-204ENST00000641744 3467 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 RAD17P2-201ENST00000451754 1977 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 Z97989.1-201ENST00000531702 2421 ntBASIC7.66□□□□□ -1.18
SMC1BQ8NDV3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 OFD1P17-201ENST00000437639 3018 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AC011008.2-201ENST00000624866 3352 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 RNU6-925P-201ENST00000384629 104 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AL133270.1-201ENST00000402635 279 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AL355143.1-201ENST00000407101 841 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 MED28P4-201ENST00000433137 572 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 SUMO2P3-201ENST00000438311 288 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AL645937.3-201ENST00000453647 936 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AL133351.3-201ENST00000454998 193 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 MTND2P30-201ENST00000456663 382 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 RN7SL369P-201ENST00000477138 299 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 RN7SL193P-201ENST00000491708 276 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AC119751.4-201ENST00000507498 357 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 HMGN1P15-201ENST00000513870 295 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 MTND1P6-201ENST00000523621 946 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AP003102.1-201ENST00000525638 661 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 OR4A42P-201ENST00000531397 938 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms