Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 ASH2LP1-201ENST00000438037 985 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AL356498.1-201ENST00000443334 334 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AL033528.1-201ENST00000453780 140 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 HAUS6P3-201ENST00000456660 1107 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC019084.1-201ENST00000457337 432 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC013267.1-201ENST00000458227 267 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC104164.4-201ENST00000483456 493 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC048346.1-201ENST00000510247 144 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC010342.1-201ENST00000514047 877 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC004217.3-201ENST00000551552 878 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC023080.1-201ENST00000551663 931 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC090950.1-201ENST00000604625 830 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AL365503.1-201ENST00000605247 905 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AL390208.1-201ENST00000605885 644 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC104794.4-201ENST00000607181 446 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 HDAC1P1-201ENST00000455482 1445 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC009237.3-203ENST00000442128 3551 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AL121950.1-201ENST00000624993 2077 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC009044.1-201ENST00000624577 1798 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TMSB4XP4-201ENST00000323496 618 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 RNA5SP250-201ENST00000362534 119 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 Y_RNA.372-201ENST00000365599 102 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 Y_RNA.453-201ENST00000384223 109 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 RNU6-297P-201ENST00000384636 107 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 SNORA40.3-201ENST00000390964 122 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 PRELID1P2-201ENST00000407805 396 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 TIMM9P3-201ENST00000428659 274 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AL353754.1-201ENST00000440219 340 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC239798.3-201ENST00000454459 408 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 RPL7P48-201ENST00000461513 746 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AP000852.1-201ENST00000472460 573 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AL928654.1-201ENST00000476081 354 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 RN7SL685P-201ENST00000476271 298 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 KLF7P1-201ENST00000490941 1048 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 ARL2BPP6-201ENST00000512757 439 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC106774.1-201ENST00000515105 321 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 MTCO1P30-201ENST00000515244 580 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 RNA5SP216-201ENST00000516111 123 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC138832.1-201ENST00000522871 556 ntBASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.56□□□□□ -1.2
DEPDC4Q8N2C3 OR6C73P-201ENST00000546432 358 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms