Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC099654.6-201ENST00000636487 512 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AC010325.3-201ENST00000641084 394 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 RLIMP2-201ENST00000427891 1563 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AP003486.1-201ENST00000525716 3994 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RN7SKP250-201ENST00000363924 321 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RNU6-1320P-201ENST00000390838 107 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RNU6-1269P-201ENST00000391139 107 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC003045.1-201ENST00000398779 713 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 THEM7P-201ENST00000419556 672 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 HMGB3P10-201ENST00000434734 572 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 ARMC4P1-201ENST00000438905 707 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RNU6-599P-201ENST00000459383 107 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RNU6-1193P-201ENST00000459461 107 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 CR383656.1-201ENST00000484916 377 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RPL29P23-201ENST00000486188 442 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 NPM1P27-201ENST00000502784 830 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC092349.1-201ENST00000504903 310 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC010343.2-201ENST00000510162 224 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 COX6B1P4-201ENST00000519826 484 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AP003033.2-201ENST00000528901 805 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AP000619.2-201ENST00000546014 969 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 WBP1LP12-201ENST00000604449 331 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC020658.4-201ENST00000613987 684 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AL445649.1-201ENST00000615941 691 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RNU6-368P-201ENST00000620928 107 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RNU6-538P-201ENST00000622329 107 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 AC004836.1-201ENST00000623032 634 ntBASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP54Q7Z3B4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC093297.3-201ENST00000607056 2517 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC073365.1-203ENST00000641055 1992 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC006511.3-201ENST00000624929 1783 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 RNA5SP478-201ENST00000364657 115 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 RNA5SP77-201ENST00000365394 120 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC002127.1-201ENST00000421305 225 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 RBMY2TP-201ENST00000451162 947 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 OR6C72P-201ENST00000451403 892 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 OR52A4P-203ENST00000498233 1014 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC147055.1-201ENST00000509261 750 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 KHDC1P1-201ENST00000511053 508 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms