Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 RNA5SP178-201ENST00000410380 128 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 Z68694.1-201ENST00000413929 841 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 EEF1B2P8-201ENST00000414101 671 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 BX510359.3-201ENST00000422168 306 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC245884.2-201ENST00000426257 404 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC127526.2-201ENST00000426436 775 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC112187.1-201ENST00000455837 479 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AP000648.1-201ENST00000529682 397 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 COX6CP7-201ENST00000597056 208 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AL031601.1-201ENST00000605702 394 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC022467.1-201ENST00000614738 749 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC003992.1-201ENST00000635364 557 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC106872.5-201ENST00000508856 1416 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AOX3P-204ENST00000491025 2107 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 AC012254.3-201ENST00000591183 2117 ntBASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 PARP4P1-201ENST00000435945 2337 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 FAM32BP-201ENST00000344033 333 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 OR10R3P-201ENST00000361688 942 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 NPM1P19-201ENST00000450070 712 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC103563.5-201ENST00000455643 364 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 RN7SL177P-201ENST00000476596 299 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC124945.1-201ENST00000485133 188 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 OOSP1P2-201ENST00000579644 351 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 MIR6768-201ENST00000610734 72 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 AC116667.2-201ENST00000641075 823 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 OR13C1P-202ENST00000641378 2919 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 WDR95P-201ENST00000425638 1542 ntBASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
SHROOM1Q2M3G4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 RN7SKP286-201ENST00000410894 299 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 RN7SKP161-201ENST00000411110 305 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 MRPL53P1-201ENST00000414323 319 ntBASIC7.04□□□□□ -1.28
SHROOM1Q2M3G4 AL513325.1-201ENST00000417716 1034 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms