Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC026458.1-201ENST00000564330 438 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 RBM22P1-201ENST00000578589 1214 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 AC083760.1-201ENST00000589621 670 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 AL035410.2-201ENST00000604963 864 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 AL138478.1-201ENST00000612252 832 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.46□□□□□ -1.22
SOX4Q06945 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC048341.3-201ENST00000619323 491 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 AL357562.1-201ENST00000624911 609 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 AC135068.11-201ENST00000636378 921 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC068137.3-201ENST00000639191 341 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC073869.6-201ENST00000640656 341 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.46□□□□□ -1.22
SOX4Q06945 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SOX4Q06945 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SOX4Q06945 ANKRD36P1-201ENST00000344424 659 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 OR10D1P-201ENST00000355343 936 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 ST13P16-201ENST00000401760 781 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 RPL7P27-201ENST00000403775 720 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 SPATA20P1-201ENST00000423089 438 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 AP003385.1-201ENST00000426387 893 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC139713.1-202ENST00000512366 460 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 IGKV2D-38-201ENST00000518423 240 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 NXPE2P1-201ENST00000543705 726 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC107993.1-201ENST00000591343 684 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 AP003392.5-201ENST00000607857 415 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 OR51C1P-201ENST00000608504 942 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 AC244100.4-201ENST00000617747 388 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC025287.2-201ENST00000621911 668 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 AL356121.2-201ENST00000624715 780 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX4Q06945 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX4Q06945 OR8A1-204ENST00000642111 1145 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 CCDC150P1-201ENST00000537123 2215 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 OR4C1P-202ENST00000641065 1569 ntBASIC7.45□□□□□ -1.22
SOX4Q06945 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX4Q06945 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX4Q06945 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms