Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF2BQ00403 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 AC022164.1-201ENST00000568767 2673 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
GTF2BQ00403 SNORD1C-201ENST00000363315 78 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 RN7SKP240-201ENST00000410583 375 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 AC066692.1-201ENST00000421721 457 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.51□□□□□ -1.37
GTF2BQ00403 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.51□□□□□ -1.37
GTF2BQ00403 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF2BQ00403 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.51□□□□□ -1.37
GTF2BQ00403 NDUFS5P5-201ENST00000437256 321 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 TOMM22P4-201ENST00000511318 336 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 Y_RNA.667-201ENST00000516212 107 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 AC018558.5-201ENST00000565840 952 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 AC079315.1-201ENST00000602952 623 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 AP003789.1-201ENST00000617737 605 ntBASIC6.51□□□□□ -1.37
GTF2BQ00403 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.51□□□□□ -1.37
GTF2BQ00403 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF2BQ00403 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF2BQ00403 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF2BQ00403 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF2BQ00403 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.51□□□□□ -1.37
GTF2BQ00403 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GTF2BQ00403 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GTF2BQ00403 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
GTF2BQ00403 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GTF2BQ00403 SUGT1P2-201ENST00000379452 992 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 SNORA70.9-201ENST00000384370 135 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 MIR621-201ENST00000384919 96 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 RPS26P38-201ENST00000414476 348 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.5□□□□□ -1.37
GTF2BQ00403 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.5□□□□□ -1.37
GTF2BQ00403 AL663074.2-201ENST00000440621 479 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.5□□□□□ -1.37
GTF2BQ00403 AL122020.1-201ENST00000472287 459 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.5□□□□□ -1.37
GTF2BQ00403 PFN1P6-201ENST00000476786 399 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 RPL38P3-201ENST00000484463 213 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.5□□□□□ -1.37
GTF2BQ00403 WBP1LP3-201ENST00000523033 208 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AP000648.1-201ENST00000529682 397 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.5□□□□□ -1.37
GTF2BQ00403 AC091078.2-201ENST00000557145 559 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AL356801.1-201ENST00000559320 294 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.5□□□□□ -1.37
GTF2BQ00403 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 AL031601.1-201ENST00000605702 394 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AL445670.1-201ENST00000618889 801 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AC129778.1-202ENST00000623812 261 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AL591379.1-207ENST00000635982 261 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GTF2BQ00403 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GTF2BQ00403 AC005224.3-201ENST00000584683 2140 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
GTF2BQ00403 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GTF2BQ00403 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.5□□□□□ -1.37
GTF2BQ00403 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GTF2BQ00403 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.5□□□□□ -1.37
GTF2BQ00403 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF2BQ00403 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GTF2BQ00403 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC6.49□□□□□ -1.37
GTF2BQ00403 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
GTF2BQ00403 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
GTF2BQ00403 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GTF2BQ00403 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GTF2BQ00403 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GTF2BQ00403 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
GTF2BQ00403 RNU1-150P-201ENST00000362491 162 ntBASIC6.49□□□□□ -1.37
GTF2BQ00403 AL451142.1-201ENST00000375867 775 ntBASIC6.49□□□□□ -1.37
GTF2BQ00403 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.49□□□□□ -1.37
GTF2BQ00403 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.49□□□□□ -1.37
GTF2BQ00403 AC115283.1-201ENST00000427353 400 ntBASIC6.49□□□□□ -1.37
GTF2BQ00403 AK3P5-201ENST00000432033 519 ntBASIC6.49□□□□□ -1.37
GTF2BQ00403 DNAJA1P5-201ENST00000440278 943 ntBASIC6.49□□□□□ -1.37
GTF2BQ00403 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.49□□□□□ -1.37
GTF2BQ00403 HMGN1P2-201ENST00000445197 310 ntBASIC6.49□□□□□ -1.37
GTF2BQ00403 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
GTF2BQ00403 TRBV5-2-201ENST00000489095 273 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms