Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RCC2P2-201ENST00000422174 918 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AL392003.1-201ENST00000434394 243 ntBASIC5.78□□□□□ -1.48
CDH12P55289 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 AL390879.1-201ENST00000439143 386 ntBASIC5.78□□□□□ -1.48
CDH12P55289 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CDH12P55289 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.78□□□□□ -1.48
CDH12P55289 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH12P55289 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CDH12P55289 AC092905.1-201ENST00000467527 949 ntBASIC5.78□□□□□ -1.48
CDH12P55289 RN7SL83P-201ENST00000468131 297 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH12P55289 AC090589.1-201ENST00000473109 362 ntBASIC5.78□□□□□ -1.48
CDH12P55289 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH12P55289 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH12P55289 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH12P55289 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH12P55289 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH12P55289 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 NPIPB1P-202ENST00000588786 828 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AL589863.1-201ENST00000595383 631 ntBASIC5.78□□□□□ -1.48
CDH12P55289 BNIP3P19-201ENST00000605397 577 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AL008582.1-201ENST00000609612 442 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AC084824.5-201ENST00000612009 413 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AL352984.2-202ENST00000613699 155 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AL138960.1-201ENST00000613838 513 ntBASIC5.78□□□□□ -1.48
CDH12P55289 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 AL590410.1-201ENST00000617925 333 ntBASIC5.78□□□□□ -1.48
CDH12P55289 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 MIR7159-201ENST00000620587 66 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AC007204.1-201ENST00000621794 555 ntBASIC5.78□□□□□ -1.48
CDH12P55289 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 AC119674.1-220ENST00000641502 1048 ntBASIC5.78□□□□□ -1.48
CDH12P55289 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH12P55289 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
CDH12P55289 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
CDH12P55289 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH12P55289 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH12P55289 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
CDH12P55289 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH12P55289 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH12P55289 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH12P55289 AL096800.1-201ENST00000405326 893 ntBASIC5.77□□□□□ -1.49
CDH12P55289 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH12P55289 GAPDHP37-201ENST00000442317 968 ntBASIC5.77□□□□□ -1.49
CDH12P55289 DNAJC19P5-201ENST00000443295 316 ntBASIC5.77□□□□□ -1.49
CDH12P55289 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH12P55289 MTND2P25-201ENST00000449028 610 ntBASIC5.77□□□□□ -1.49
CDH12P55289 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH12P55289 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH12P55289 AC073594.1-201ENST00000462065 364 ntBASIC5.77□□□□□ -1.49
CDH12P55289 RN7SL790P-201ENST00000474043 298 ntBASIC5.77□□□□□ -1.49
CDH12P55289 RN7SL413P-201ENST00000482700 297 ntBASIC5.77□□□□□ -1.49
CDH12P55289 RN7SL267P-201ENST00000485107 261 ntBASIC5.77□□□□□ -1.49
CDH12P55289 RN7SL714P-201ENST00000487050 298 ntBASIC5.77□□□□□ -1.49
CDH12P55289 AC104629.1-201ENST00000494226 508 ntBASIC5.77□□□□□ -1.49
CDH12P55289 AC008945.1-201ENST00000505144 499 ntBASIC5.77□□□□□ -1.49
CDH12P55289 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH12P55289 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH12P55289 AC010343.2-201ENST00000510162 224 ntBASIC5.77□□□□□ -1.49
CDH12P55289 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH12P55289 AC008429.4-201ENST00000521201 182 ntBASIC5.77□□□□□ -1.49
CDH12P55289 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH12P55289 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH12P55289 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH12P55289 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH12P55289 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH12P55289 AL139022.2-201ENST00000606934 443 ntBASIC5.77□□□□□ -1.49
CDH12P55289 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH12P55289 AL352984.2-201ENST00000611153 546 ntBASIC5.77□□□□□ -1.49
CDH12P55289 MIR6070-201ENST00000613967 103 ntBASIC5.77□□□□□ -1.49
CDH12P55289 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH12P55289 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH12P55289 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH12P55289 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH12P55289 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH12P55289 AL359955.1-201ENST00000455242 3275 ntBASIC5.77□□□□□ -1.49
CDH12P55289 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH12P55289 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms