Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNA5SP473-201ENST00000516402 125 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AC135983.3-201ENST00000528049 1226 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH11P55287 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH11P55287 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH11P55287 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH11P55287 AC026956.1-201ENST00000558741 396 ntBASIC5.68□□□□□ -1.5
CDH11P55287 MIR4420-201ENST00000583944 77 ntBASIC5.68□□□□□ -1.5
CDH11P55287 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH11P55287 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 GLYATL1P2-202ENST00000588046 902 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AL589765.6-201ENST00000601909 549 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AC004805.3-201ENST00000603178 310 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AC009237.12-201ENST00000604755 742 ntBASIC5.68□□□□□ -1.5
CDH11P55287 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH11P55287 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH11P55287 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH11P55287 AL391597.1-201ENST00000618707 694 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AC069234.4-201ENST00000621276 412 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AC003992.1-201ENST00000635364 557 ntBASIC5.68□□□□□ -1.5
CDH11P55287 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH11P55287 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH11P55287 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 AL121839.2-201ENST00000565058 6943 ntBASIC5.68□□□□□ -1.5
CDH11P55287 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDH11P55287 AC022164.1-201ENST00000568767 2673 ntBASIC5.68□□□□□ -1.5
CDH11P55287 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH11P55287 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 LINC01613-201ENST00000561476 2780 ntBASIC5.67□□□□□ -1.5
CDH11P55287 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH11P55287 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 BRAFP1-201ENST00000445336 2703 ntBASIC5.67□□□□□ -1.5
CDH11P55287 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH11P55287 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH11P55287 AC083799.1-201ENST00000366451 910 ntBASIC5.67□□□□□ -1.5
CDH11P55287 MRPS6P2-201ENST00000381143 370 ntBASIC5.67□□□□□ -1.5
CDH11P55287 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH11P55287 MIR1275-201ENST00000408770 80 ntBASIC5.67□□□□□ -1.5
CDH11P55287 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH11P55287 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH11P55287 AL157884.1-201ENST00000424561 454 ntBASIC5.67□□□□□ -1.5
CDH11P55287 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 AL138899.2-201ENST00000439139 499 ntBASIC5.67□□□□□ -1.5
CDH11P55287 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH11P55287 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH11P55287 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH11P55287 REG1CP-206ENST00000447469 496 ntBASIC5.67□□□□□ -1.5
CDH11P55287 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH11P55287 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 MORF4L2P1-201ENST00000503761 858 ntBASIC5.67□□□□□ -1.5
CDH11P55287 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 RN7SKP70-201ENST00000516655 271 ntBASIC5.67□□□□□ -1.5
CDH11P55287 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH11P55287 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH11P55287 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH11P55287 HNRNPCP1-201ENST00000556181 766 ntBASIC5.67□□□□□ -1.5
CDH11P55287 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 AC133552.4-201ENST00000576103 676 ntBASIC5.67□□□□□ -1.5
CDH11P55287 SETP3-201ENST00000581726 813 ntBASIC5.67□□□□□ -1.5
CDH11P55287 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH11P55287 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 AC027334.1-201ENST00000603257 310 ntBASIC5.67□□□□□ -1.5
CDH11P55287 AL122023.1-201ENST00000622847 530 ntBASIC5.67□□□□□ -1.5
CDH11P55287 AL683826.1-201ENST00000624104 627 ntBASIC5.67□□□□□ -1.5
CDH11P55287 AC073592.6-201ENST00000624271 415 ntBASIC5.67□□□□□ -1.5
CDH11P55287 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH11P55287 OR7E91P-202ENST00000642062 1198 ntBASIC5.67□□□□□ -1.5
CDH11P55287 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH11P55287 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH11P55287 AC083837.1-201ENST00000565297 2994 ntBASIC5.67□□□□□ -1.5
CDH11P55287 Z95114.1-201ENST00000624264 14574 ntBASIC5.67□□□□□ -1.5
CDH11P55287 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CDH11P55287 AC005702.3-201ENST00000585345 1447 ntBASIC5.66□□□□□ -1.5
CDH11P55287 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 AP001541.1-201ENST00000623322 1904 ntBASIC5.66□□□□□ -1.5
CDH11P55287 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms