Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL133445.2-201ENST00000611191 527 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AC073575.2-201ENST00000614212 627 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 MIR6849-201ENST00000618543 69 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 MRPL57P3-201ENST00000619218 176 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 CASC19-228ENST00000641414 1684 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 CAP1P2-201ENST00000417455 1409 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 DDX6P1-205ENST00000441966 1436 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 RN7SKP189-201ENST00000365042 330 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 RNU6-1263P-201ENST00000384601 106 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 RN7SKP17-201ENST00000411242 351 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.1□□□□□ -1.43
NR1H2P55055 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 RPL5P2-201ENST00000429598 854 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.1□□□□□ -1.43
NR1H2P55055 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.1□□□□□ -1.43
NR1H2P55055 AL445991.1-201ENST00000450381 475 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 AL117692.1-201ENST00000494283 713 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 AC097486.1-201ENST00000515331 210 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.1□□□□□ -1.43
NR1H2P55055 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.1□□□□□ -1.43
NR1H2P55055 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.1□□□□□ -1.43
NR1H2P55055 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.1□□□□□ -1.43
NR1H2P55055 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 AC040174.2-201ENST00000602701 465 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 AC005021.1-201ENST00000608730 355 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 AL356094.1-201ENST00000624663 1212 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 CLUHP10-201ENST00000631979 980 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.1□□□□□ -1.43
NR1H2P55055 AC000095.2-202ENST00000637415 154 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NR1H2P55055 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 DNM1P47-203ENST00000571780 12667 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NR1H2P55055 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NR1H2P55055 AC024341.1-201ENST00000526444 1552 ntBASIC6.1□□□□□ -1.43
NR1H2P55055 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NR1H2P55055 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NR1H2P55055 AC017002.4-201ENST00000604721 1525 ntBASIC6.09□□□□□ -1.43
NR1H2P55055 CASC19-260ENST00000641828 2001 ntBASIC6.09□□□□□ -1.43
NR1H2P55055 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NR1H2P55055 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NR1H2P55055 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NR1H2P55055 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NR1H2P55055 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.09□□□□□ -1.43
NR1H2P55055 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NR1H2P55055 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.09□□□□□ -1.43
NR1H2P55055 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.09□□□□□ -1.43
NR1H2P55055 AC105235.1-201ENST00000623208 1816 ntBASIC6.09□□□□□ -1.43
NR1H2P55055 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NR1H2P55055 NEK2P2-201ENST00000438441 1338 ntBASIC6.09□□□□□ -1.43
NR1H2P55055 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms