Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 AC012123.2-201ENST00000485809 248 ntBASIC6.63□□□□□ -1.35
COPAP53621 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.63□□□□□ -1.35
COPAP53621 RPL19P11-201ENST00000495944 589 ntBASIC6.63□□□□□ -1.35
COPAP53621 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 RNA5SP441-201ENST00000516809 88 ntBASIC6.63□□□□□ -1.35
COPAP53621 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 TOMM20P1-201ENST00000534518 427 ntBASIC6.63□□□□□ -1.35
COPAP53621 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COPAP53621 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.63□□□□□ -1.35
COPAP53621 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COPAP53621 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COPAP53621 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 AL049840.5-201ENST00000602827 552 ntBASIC6.63□□□□□ -1.35
COPAP53621 SMIM12P1-201ENST00000603004 274 ntBASIC6.63□□□□□ -1.35
COPAP53621 AC024933.1-201ENST00000608472 348 ntBASIC6.63□□□□□ -1.35
COPAP53621 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.63□□□□□ -1.35
COPAP53621 AL512506.1-201ENST00000613918 449 ntBASIC6.63□□□□□ -1.35
COPAP53621 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.63□□□□□ -1.35
COPAP53621 AC010333.3-201ENST00000615100 402 ntBASIC6.63□□□□□ -1.35
COPAP53621 AC018659.2-201ENST00000624690 715 ntBASIC6.63□□□□□ -1.35
COPAP53621 MIR1910-201ENST00000636955 80 ntBASIC6.63□□□□□ -1.35
COPAP53621 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.63□□□□□ -1.35
COPAP53621 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.63□□□□□ -1.35
COPAP53621 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.62□□□□□ -1.35
COPAP53621 AC011504.1-201ENST00000623331 4103 ntBASIC6.62□□□□□ -1.35
COPAP53621 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 AC006511.3-201ENST00000624929 1783 ntBASIC6.62□□□□□ -1.35
COPAP53621 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COPAP53621 OR11H13P-201ENST00000359695 979 ntBASIC6.62□□□□□ -1.35
COPAP53621 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COPAP53621 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.62□□□□□ -1.35
COPAP53621 AP003170.5-201ENST00000397185 335 ntBASIC6.62□□□□□ -1.35
COPAP53621 RPL5P20-201ENST00000403848 896 ntBASIC6.62□□□□□ -1.35
COPAP53621 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.62□□□□□ -1.35
COPAP53621 MRPS33P4-201ENST00000434892 317 ntBASIC6.62□□□□□ -1.35
COPAP53621 AC245452.2-201ENST00000435222 392 ntBASIC6.62□□□□□ -1.35
COPAP53621 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.62□□□□□ -1.35
COPAP53621 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.62□□□□□ -1.35
COPAP53621 AC016687.1-201ENST00000482574 353 ntBASIC6.62□□□□□ -1.35
COPAP53621 MTND3P24-201ENST00000506306 329 ntBASIC6.62□□□□□ -1.35
COPAP53621 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.62□□□□□ -1.35
COPAP53621 MAST4-IT1-201ENST00000514241 658 ntBASIC6.62□□□□□ -1.35
COPAP53621 NPM1P5-201ENST00000557228 838 ntBASIC6.62□□□□□ -1.35
COPAP53621 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.62□□□□□ -1.35
COPAP53621 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.62□□□□□ -1.35
COPAP53621 AL135999.3-201ENST00000610501 812 ntBASIC6.62□□□□□ -1.35
COPAP53621 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.62□□□□□ -1.35
COPAP53621 AC005277.2-201ENST00000617898 390 ntBASIC6.62□□□□□ -1.35
COPAP53621 MIR6778-201ENST00000617912 73 ntBASIC6.62□□□□□ -1.35
COPAP53621 AC004836.1-201ENST00000623032 634 ntBASIC6.62□□□□□ -1.35
COPAP53621 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.62□□□□□ -1.35
COPAP53621 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.62□□□□□ -1.35
COPAP53621 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
COPAP53621 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
COPAP53621 PROS2P-201ENST00000474651 1951 ntBASIC6.62□□□□□ -1.35
COPAP53621 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPAP53621 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.62□□□□□ -1.35
COPAP53621 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COPAP53621 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.61□□□□□ -1.35
COPAP53621 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPAP53621 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPAP53621 SMG1P5-202ENST00000529428 4219 ntBASIC6.61□□□□□ -1.35
COPAP53621 SMG1P2-201ENST00000566127 4221 ntBASIC6.61□□□□□ -1.35
COPAP53621 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
COPAP53621 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.61□□□□□ -1.35
COPAP53621 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COPAP53621 RPL11P4-201ENST00000332269 436 ntBASIC6.61□□□□□ -1.35
COPAP53621 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COPAP53621 RN7SKP237-201ENST00000364663 301 ntBASIC6.61□□□□□ -1.35
COPAP53621 SNORA27.3-201ENST00000364937 134 ntBASIC6.61□□□□□ -1.35
COPAP53621 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPAP53621 MIR188-201ENST00000385034 86 ntBASIC6.61□□□□□ -1.35
COPAP53621 OR7E156P-201ENST00000400303 464 ntBASIC6.61□□□□□ -1.35
COPAP53621 MIR1282-201ENST00000408865 101 ntBASIC6.61□□□□□ -1.35
COPAP53621 RNA5SP115-201ENST00000411160 107 ntBASIC6.61□□□□□ -1.35
COPAP53621 AC013410.2-201ENST00000422627 201 ntBASIC6.61□□□□□ -1.35
COPAP53621 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms