Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC126615.2-201ENST00000553003 515 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40LGP29965 BMS1P16-201ENST00000556075 1147 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40LGP29965 ANP32BP1-202ENST00000568553 737 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 AC090826.1-203ENST00000569235 490 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40LGP29965 AL512430.4-201ENST00000603085 613 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 AL078624.2-201ENST00000605063 554 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 PTCHD3P1-201ENST00000612350 537 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 MIR6133-201ENST00000617057 108 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 AC117503.3-201ENST00000623811 601 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40LGP29965 AC132825.8-201ENST00000640783 297 ntBASIC5.39□□□□□ -1.55
CD40LGP29965 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40LGP29965 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD40LGP29965 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD40LGP29965 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD40LGP29965 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CD40LGP29965 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
CD40LGP29965 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40LGP29965 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 RN7SKP257-201ENST00000364525 309 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 RNA5SP355-201ENST00000365317 135 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CD40LGP29965 RNA5SP176-201ENST00000390956 110 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 MRPL32P1-201ENST00000406301 247 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 NMD3P2-201ENST00000421815 761 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 AL672212.1-201ENST00000422246 400 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40LGP29965 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40LGP29965 CUBNP2-201ENST00000443534 1139 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 RBMY2EP-202ENST00000456360 940 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40LGP29965 OR9A1P-202ENST00000484361 945 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40LGP29965 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 AL390198.2-201ENST00000510553 222 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40LGP29965 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40LGP29965 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40LGP29965 AP004607.5-201ENST00000532034 217 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40LGP29965 MIR4800-201ENST00000537353 80 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.38□□□□□ -1.55
CD40LGP29965 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40LGP29965 AL591222.2-201ENST00000604443 754 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 AL355974.3-201ENST00000617383 467 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 AP003108.4-201ENST00000623917 878 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40LGP29965 AC073488.9-201ENST00000631601 754 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40LGP29965 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CD40LGP29965 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40LGP29965 CDC27P2-201ENST00000425026 1922 ntBASIC5.38□□□□□ -1.55
CD40LGP29965 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.38□□□□□ -1.55
CD40LGP29965 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CD40LGP29965 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40LGP29965 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40LGP29965 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40LGP29965 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
CD40LGP29965 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CD40LGP29965 RPL11P3-201ENST00000395256 523 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 AL391419.1-201ENST00000398901 1275 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 EEF1GP6-201ENST00000402309 905 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40LGP29965 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 AC114402.2-201ENST00000432760 643 ntBASIC5.37□□□□□ -1.55
CD40LGP29965 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40LGP29965 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms