Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH3P22223 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.12□□□□□ -1.43
CDH3P22223 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH3P22223 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 NPM1P5-201ENST00000557228 838 ntBASIC6.12□□□□□ -1.43
CDH3P22223 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.12□□□□□ -1.43
CDH3P22223 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH3P22223 AC079791.1-201ENST00000605356 973 ntBASIC6.12□□□□□ -1.43
CDH3P22223 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.12□□□□□ -1.43
CDH3P22223 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
CDH3P22223 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CDH3P22223 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH3P22223 AC020633.1-201ENST00000468439 2247 ntBASIC6.11□□□□□ -1.43
CDH3P22223 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDH3P22223 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH3P22223 PROS2P-201ENST00000474651 1951 ntBASIC6.11□□□□□ -1.43
CDH3P22223 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH3P22223 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH3P22223 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDH3P22223 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH3P22223 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH3P22223 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH3P22223 SNORD8-201ENST00000363915 110 ntBASIC6.11□□□□□ -1.43
CDH3P22223 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 AL157702.1-201ENST00000398764 426 ntBASIC6.11□□□□□ -1.43
CDH3P22223 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CDH3P22223 RPS17P17-201ENST00000419392 409 ntBASIC6.11□□□□□ -1.43
CDH3P22223 AC117434.1-201ENST00000419971 836 ntBASIC6.11□□□□□ -1.43
CDH3P22223 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH3P22223 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 AC013410.1-201ENST00000436223 1232 ntBASIC6.11□□□□□ -1.43
CDH3P22223 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 RPSAP40-201ENST00000442343 891 ntBASIC6.11□□□□□ -1.43
CDH3P22223 AC068491.1-201ENST00000449539 1241 ntBASIC6.11□□□□□ -1.43
CDH3P22223 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
CDH3P22223 SNX18P24-201ENST00000505249 671 ntBASIC6.11□□□□□ -1.43
CDH3P22223 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH3P22223 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 AL845552.1-201ENST00000556820 323 ntBASIC6.11□□□□□ -1.43
CDH3P22223 AC007494.1-201ENST00000562293 760 ntBASIC6.11□□□□□ -1.43
CDH3P22223 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 AC005332.4-201ENST00000592752 579 ntBASIC6.11□□□□□ -1.43
CDH3P22223 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH3P22223 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH3P22223 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH3P22223 AC138627.1-204ENST00000641894 765 ntBASIC6.11□□□□□ -1.43
CDH3P22223 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH3P22223 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH3P22223 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH3P22223 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH3P22223 AL136984.1-201ENST00000607611 1893 ntBASIC6.11□□□□□ -1.43
CDH3P22223 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH3P22223 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH3P22223 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH3P22223 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH3P22223 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDH3P22223 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH3P22223 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
CDH3P22223 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH3P22223 AP001284.1-201ENST00000528393 2118 ntBASIC6.1□□□□□ -1.43
CDH3P22223 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDH3P22223 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH3P22223 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH3P22223 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDH3P22223 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH3P22223 RNA5SP115-201ENST00000411160 107 ntBASIC6.1□□□□□ -1.43
CDH3P22223 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH3P22223 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH3P22223 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH3P22223 GAPDHP34-201ENST00000432112 823 ntBASIC6.1□□□□□ -1.43
CDH3P22223 IGLV3-4-201ENST00000432300 244 ntBASIC6.1□□□□□ -1.43
CDH3P22223 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.1□□□□□ -1.43
CDH3P22223 AC094019.1-201ENST00000434678 472 ntBASIC6.1□□□□□ -1.43
CDH3P22223 SOCS5P1-201ENST00000440415 949 ntBASIC6.1□□□□□ -1.43
CDH3P22223 PCNPP2-201ENST00000441651 455 ntBASIC6.1□□□□□ -1.43
CDH3P22223 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH3P22223 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH3P22223 HMGB1P7-201ENST00000450921 612 ntBASIC6.1□□□□□ -1.43
CDH3P22223 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH3P22223 RPL12P31-201ENST00000478433 450 ntBASIC6.1□□□□□ -1.43
CDH3P22223 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH3P22223 RN7SL104P-201ENST00000498686 293 ntBASIC6.1□□□□□ -1.43
CDH3P22223 AC091874.2-201ENST00000505889 720 ntBASIC6.1□□□□□ -1.43
CDH3P22223 RN7SKP70-201ENST00000516655 271 ntBASIC6.1□□□□□ -1.43
CDH3P22223 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH3P22223 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH3P22223 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH3P22223 AC026826.3-201ENST00000561747 158 ntBASIC6.1□□□□□ -1.43
CDH3P22223 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH3P22223 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH3P22223 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH3P22223 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
CDH3P22223 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH3P22223 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms