Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 TRIM60P14-201ENST00000513444 1419 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
NFKB1P19838 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 IL6STP1-201ENST00000346911 1020 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 RN7SKP63-201ENST00000363187 301 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 RNU6-931P-201ENST00000363850 107 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.56□□□□□ -1.2
NFKB1P19838 VN1R12P-201ENST00000403778 876 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 RN7SKP131-201ENST00000410698 301 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 CEACAMP8-201ENST00000413902 580 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC231533.2-201ENST00000419045 978 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC7.56□□□□□ -1.2
NFKB1P19838 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC023128.2-201ENST00000420880 1223 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AL022400.1-201ENST00000423946 935 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.56□□□□□ -1.2
NFKB1P19838 RPL5P4-201ENST00000434805 886 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.56□□□□□ -1.2
NFKB1P19838 RPSAP49-201ENST00000445182 886 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 LIN28AP2-201ENST00000445283 458 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 ST13P20-201ENST00000447996 1065 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 MTND5P20-201ENST00000448677 143 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 CCNJP2-201ENST00000457810 1163 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 GLRXP3-201ENST00000470810 321 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC084878.1-201ENST00000480555 648 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 Z99943.2-201ENST00000507585 266 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC117522.1-201ENST00000509821 380 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC006499.4-201ENST00000510947 694 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 RNU6-718P-201ENST00000516166 105 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 RN7SKP244-201ENST00000516513 307 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 KCTD9P6-201ENST00000522306 950 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 OR6C7P-201ENST00000547875 934 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.56□□□□□ -1.2
NFKB1P19838 OR4F28P-201ENST00000559128 938 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC079171.1-201ENST00000568788 914 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC008507.1-201ENST00000587506 734 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.56□□□□□ -1.2
NFKB1P19838 OR4F8P-201ENST00000589943 937 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 WBP1LP12-201ENST00000604449 331 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 SUMO2P14-201ENST00000604488 293 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC018714.1-201ENST00000605028 208 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 MIR7162-201ENST00000611134 69 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC023310.4-201ENST00000613130 650 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC063943.3-201ENST00000615562 356 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 AL607023.1-201ENST00000620045 248 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
NFKB1P19838 AC004009.2-201ENST00000623016 728 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
NFKB1P19838 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 TTC39DP-201ENST00000416781 1688 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
NFKB1P19838 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 AC009948.3-201ENST00000603415 1798 ntBASIC7.56□□□□□ -1.2
NFKB1P19838 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
NFKB1P19838 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
NFKB1P19838 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NFKB1P19838 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.55□□□□□ -1.2
NFKB1P19838 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
NFKB1P19838 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
NFKB1P19838 OR52K3P-202ENST00000641797 1729 ntBASIC7.55□□□□□ -1.2
NFKB1P19838 AC011477.1-204ENST00000623416 1325 ntBASIC7.55□□□□□ -1.2
NFKB1P19838 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.55□□□□□ -1.2
NFKB1P19838 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.55□□□□□ -1.2
NFKB1P19838 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
NFKB1P19838 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms