Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.59□□□□□ -1.67
CXCL1P09341 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL1P09341 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL1P09341 AC091932.1-201ENST00000569381 427 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 RNU4ATAC-201ENST00000580972 127 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 MIR4472-2-201ENST00000582069 67 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL1P09341 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.59□□□□□ -1.67
CXCL1P09341 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.59□□□□□ -1.67
CXCL1P09341 AC024451.4-201ENST00000602578 752 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 NDUFB9P1-201ENST00000604683 510 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AC114477.1-201ENST00000605097 605 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
CXCL1P09341 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL1P09341 AC126474.2-201ENST00000623268 1750 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AC005858.3-201ENST00000624756 589 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL1P09341 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL1P09341 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.59□□□□□ -1.67
CXCL1P09341 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL1P09341 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CXCL1P09341 ABCC13-202ENST00000463099 3842 ntBASIC4.59□□□□□ -1.68
CXCL1P09341 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CXCL1P09341 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.59□□□□□ -1.68
CXCL1P09341 GVINP1-202ENST00000531871 7271 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL1P09341 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 AC020656.2-201ENST00000613291 5309 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 AL138847.1-201ENST00000258651 546 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CXCL1P09341 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 RN7SKP281-201ENST00000410472 352 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 RN7SKP279-201ENST00000411383 298 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 NPM1P40-201ENST00000412758 733 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL1P09341 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.58□□□□□ -1.68
CXCL1P09341 AL020997.1-201ENST00000446554 349 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL1P09341 UOX-201ENST00000471089 899 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.58□□□□□ -1.68
CXCL1P09341 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL1P09341 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC127381.1-201ENST00000555979 939 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC092718.4-201ENST00000566639 716 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AC106730.2-201ENST00000566641 540 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AC126323.4-201ENST00000566935 234 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 RN7SL426P-201ENST00000579106 295 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 AL513327.3-201ENST00000602618 469 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 Z95327.3-201ENST00000610385 572 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.58□□□□□ -1.68
CXCL1P09341 AL355974.3-201ENST00000617383 467 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL1P09341 LINC02495-203ENST00000636704 242 ntBASIC4.58□□□□□ -1.68
CXCL1P09341 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL1P09341 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL1P09341 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CXCL1P09341 AC025574.1-201ENST00000554784 1653 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL1P09341 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL1P09341 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.57□□□□□ -1.68
CXCL1P09341 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CXCL1P09341 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL1P09341 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL1P09341 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.57□□□□□ -1.68
CXCL1P09341 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CXCL1P09341 EI24P3-201ENST00000399046 1062 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 EEF1GP6-201ENST00000402309 905 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL1P09341 RN7SKP30-201ENST00000411373 334 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL1P09341 AL589794.1-201ENST00000424971 390 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 317.8 ms