Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
RETP07949 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RETP07949 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RETP07949 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 AC006511.3-201ENST00000624929 1783 ntBASIC6.32□□□□□ -1.4
RETP07949 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.32□□□□□ -1.4
RETP07949 AC005332.9-201ENST00000620266 2921 ntBASIC6.32□□□□□ -1.4
RETP07949 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RETP07949 RNA5SP110-201ENST00000362638 115 ntBASIC6.32□□□□□ -1.4
RETP07949 RNA5SP443-201ENST00000363083 132 ntBASIC6.32□□□□□ -1.4
RETP07949 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RETP07949 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RETP07949 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.32□□□□□ -1.4
RETP07949 RN7SL610P-201ENST00000463845 291 ntBASIC6.32□□□□□ -1.4
RETP07949 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.32□□□□□ -1.4
RETP07949 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.32□□□□□ -1.4
RETP07949 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.32□□□□□ -1.4
RETP07949 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.32□□□□□ -1.4
RETP07949 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.32□□□□□ -1.4
RETP07949 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.32□□□□□ -1.4
RETP07949 AC125494.2-201ENST00000602431 657 ntBASIC6.32□□□□□ -1.4
RETP07949 AL512652.1-201ENST00000619006 500 ntBASIC6.32□□□□□ -1.4
RETP07949 AC004836.1-201ENST00000623032 634 ntBASIC6.32□□□□□ -1.4
RETP07949 AC018628.1-201ENST00000624147 3819 ntBASIC6.32□□□□□ -1.4
RETP07949 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.32□□□□□ -1.4
RETP07949 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RETP07949 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RETP07949 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RETP07949 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 AL353743.3-201ENST00000442109 1468 ntBASIC6.32□□□□□ -1.4
RETP07949 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RETP07949 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RETP07949 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.32□□□□□ -1.4
RETP07949 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.32□□□□□ -1.4
RETP07949 AC073429.2-201ENST00000569694 1444 ntBASIC6.32□□□□□ -1.4
RETP07949 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.32□□□□□ -1.4
RETP07949 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.32□□□□□ -1.4
RETP07949 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
RETP07949 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RETP07949 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RETP07949 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.31□□□□□ -1.4
RETP07949 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RETP07949 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.31□□□□□ -1.4
RETP07949 SNORD16-201ENST00000362803 99 ntBASIC6.31□□□□□ -1.4
RETP07949 SNORA58B-201ENST00000364259 136 ntBASIC6.31□□□□□ -1.4
RETP07949 NPM1P38-201ENST00000403835 865 ntBASIC6.31□□□□□ -1.4
RETP07949 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.31□□□□□ -1.4
RETP07949 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.31□□□□□ -1.4
RETP07949 AL627308.1-201ENST00000435693 821 ntBASIC6.31□□□□□ -1.4
RETP07949 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.31□□□□□ -1.4
RETP07949 AC064862.4-201ENST00000442180 334 ntBASIC6.31□□□□□ -1.4
RETP07949 AC016908.1-201ENST00000442571 1219 ntBASIC6.31□□□□□ -1.4
RETP07949 AL445665.1-202ENST00000452436 324 ntBASIC6.31□□□□□ -1.4
RETP07949 YWHAEP1-201ENST00000453697 763 ntBASIC6.31□□□□□ -1.4
RETP07949 AL133351.3-201ENST00000454998 193 ntBASIC6.31□□□□□ -1.4
RETP07949 RPS23P1-201ENST00000491662 432 ntBASIC6.31□□□□□ -1.4
RETP07949 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.31□□□□□ -1.4
RETP07949 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RETP07949 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.31□□□□□ -1.4
RETP07949 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.31□□□□□ -1.4
RETP07949 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.31□□□□□ -1.4
RETP07949 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.31□□□□□ -1.4
RETP07949 MIR4700-201ENST00000578311 74 ntBASIC6.31□□□□□ -1.4
RETP07949 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.31□□□□□ -1.4
RETP07949 AC068768.2-201ENST00000602352 343 ntBASIC6.31□□□□□ -1.4
RETP07949 AP001823.1-201ENST00000604056 1003 ntBASIC6.31□□□□□ -1.4
RETP07949 AC004948.1-201ENST00000609858 672 ntBASIC6.31□□□□□ -1.4
RETP07949 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.31□□□□□ -1.4
RETP07949 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.31□□□□□ -1.4
RETP07949 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.31□□□□□ -1.4
RETP07949 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
RETP07949 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RETP07949 AC007159.1-201ENST00000566529 4706 ntBASIC6.31□□□□□ -1.4
RETP07949 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RETP07949 AL022323.4-201ENST00000623980 13120 ntBASIC6.31□□□□□ -1.4
RETP07949 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RETP07949 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RETP07949 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RETP07949 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
RETP07949 GTF2IP4-201ENST00000453092 2054 ntBASIC6.3□□□□□ -1.4
RETP07949 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.3□□□□□ -1.4
RETP07949 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms