Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 THAP12P9-201ENST00000503971 2360 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AL079341.1-201ENST00000404701 1207 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 RN7SKP205-201ENST00000410999 307 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 REREP1Y-201ENST00000422655 198 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC000089.1-201ENST00000424559 801 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 REREP2Y-201ENST00000439103 200 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 GAPDHP33-201ENST00000443168 1013 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC010240.2-201ENST00000445363 1205 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC022080.2-201ENST00000452932 533 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 FRG2FP-204ENST00000453982 852 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 COX6B1P2-201ENST00000489624 230 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 EIF3LP3-201ENST00000495197 822 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC126615.2-201ENST00000553003 515 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AL353729.2-201ENST00000605859 1249 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AL355974.3-201ENST00000617383 467 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 MIR6085-201ENST00000618314 110 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC073488.9-201ENST00000631601 754 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LINC02019-201ENST00000608605 2060 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AL603750.1-201ENST00000624216 1717 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 PTCD2P2-201ENST00000415579 1095 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 BMS1P11-201ENST00000442351 885 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC092106.1-201ENST00000444291 373 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 RPL12P39-201ENST00000455456 496 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 TREML3P-201ENST00000457327 501 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 BMS1P9-201ENST00000457640 885 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 RPL7L1P7-201ENST00000509986 724 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC010442.1-201ENST00000515583 816 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 RN7SKP288-201ENST00000516227 268 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC009729.1-201ENST00000548873 1133 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms