Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL391987.1-201ENST00000441025 200 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.05□□□□□ -1.44
LDLRP01130 SNRPBP1-201ENST00000443634 282 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC023274.2-201ENST00000445264 521 ntBASIC6.05□□□□□ -1.44
LDLRP01130 FCF1P7-201ENST00000451185 558 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AL022319.1-201ENST00000458183 1167 ntBASIC6.05□□□□□ -1.44
LDLRP01130 RN7SL39P-201ENST00000462264 297 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC022415.1-202ENST00000486612 523 ntBASIC6.05□□□□□ -1.44
LDLRP01130 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.05□□□□□ -1.44
LDLRP01130 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.05□□□□□ -1.44
LDLRP01130 AC093870.1-201ENST00000506837 213 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.05□□□□□ -1.44
LDLRP01130 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.05□□□□□ -1.44
LDLRP01130 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.05□□□□□ -1.44
LDLRP01130 IGKV2-19-201ENST00000518132 283 ntBASIC6.05□□□□□ -1.44
LDLRP01130 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.05□□□□□ -1.44
LDLRP01130 AC135983.3-201ENST00000528049 1226 ntBASIC6.05□□□□□ -1.44
LDLRP01130 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.05□□□□□ -1.44
LDLRP01130 AC090651.1-201ENST00000567865 634 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LDLRP01130 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.05□□□□□ -1.44
LDLRP01130 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.05□□□□□ -1.44
LDLRP01130 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 AL589743.6-201ENST00000611025 117 ntBASIC6.05□□□□□ -1.44
LDLRP01130 MIR6886-201ENST00000619864 61 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC069542.2-201ENST00000624816 216 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 AC022726.2-201ENST00000634673 547 ntBASIC6.05□□□□□ -1.44
LDLRP01130 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 AC092724.1-201ENST00000624623 3397 ntBASIC6.05□□□□□ -1.44
LDLRP01130 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LDLRP01130 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.05□□□□□ -1.44
LDLRP01130 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.05□□□□□ -1.44
LDLRP01130 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 AC093297.3-201ENST00000607056 2517 ntBASIC6.04□□□□□ -1.44
LDLRP01130 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 AL359976.1-201ENST00000418655 3528 ntBASIC6.04□□□□□ -1.44
LDLRP01130 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 AC023245.2-201ENST00000530760 2978 ntBASIC6.04□□□□□ -1.44
LDLRP01130 MSL3P1-202ENST00000440028 1468 ntBASIC6.04□□□□□ -1.44
LDLRP01130 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
LDLRP01130 AOX3P-204ENST00000491025 2107 ntBASIC6.04□□□□□ -1.44
LDLRP01130 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 RNA5SP478-201ENST00000364657 115 ntBASIC6.04□□□□□ -1.44
LDLRP01130 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.04□□□□□ -1.44
LDLRP01130 MIR188-201ENST00000385034 86 ntBASIC6.04□□□□□ -1.44
LDLRP01130 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LDLRP01130 YWHAZP4-201ENST00000392459 708 ntBASIC6.04□□□□□ -1.44
LDLRP01130 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.04□□□□□ -1.44
LDLRP01130 U3.43-201ENST00000410734 213 ntBASIC6.04□□□□□ -1.44
LDLRP01130 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.04□□□□□ -1.44
LDLRP01130 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.04□□□□□ -1.44
LDLRP01130 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.04□□□□□ -1.44
LDLRP01130 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.04□□□□□ -1.44
LDLRP01130 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 RN7SL101P-201ENST00000496350 279 ntBASIC6.04□□□□□ -1.44
LDLRP01130 OR52A4P-203ENST00000498233 1014 ntBASIC6.04□□□□□ -1.44
LDLRP01130 AC091849.1-201ENST00000509920 121 ntBASIC6.04□□□□□ -1.44
LDLRP01130 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.04□□□□□ -1.44
LDLRP01130 SNRPCP6-201ENST00000528310 210 ntBASIC6.04□□□□□ -1.44
LDLRP01130 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.04□□□□□ -1.44
LDLRP01130 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 AC124916.2-201ENST00000604416 224 ntBASIC6.04□□□□□ -1.44
LDLRP01130 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.04□□□□□ -1.44
LDLRP01130 AC107905.1-201ENST00000616204 426 ntBASIC6.04□□□□□ -1.44
LDLRP01130 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.04□□□□□ -1.44
LDLRP01130 AC243960.7-201ENST00000623532 707 ntBASIC6.04□□□□□ -1.44
LDLRP01130 SNX18P12-201ENST00000624821 759 ntBASIC6.04□□□□□ -1.44
LDLRP01130 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LDLRP01130 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 AC074141.1-201ENST00000588129 2995 ntBASIC6.04□□□□□ -1.44
LDLRP01130 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LDLRP01130 NCOA4P2-201ENST00000340589 1813 ntBASIC6.04□□□□□ -1.44
LDLRP01130 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms