Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 RN7SKP69-201ENST00000365390 305 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 RNA5SP156-201ENST00000410250 110 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 RN7SKP144-201ENST00000411108 279 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 RPL7AP14-201ENST00000424041 802 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 OSTCP4-201ENST00000424397 449 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC016027.4-201ENST00000450866 277 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 RPS10P28-201ENST00000480396 498 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 RN7SL350P-201ENST00000492591 299 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 RN7SKP64-201ENST00000517206 328 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 OR4A43P-201ENST00000532938 908 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 AC103855.4-201ENST00000533158 265 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 OR4C49P-201ENST00000563891 900 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 AC027216.1-201ENST00000577726 685 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 RPL7AP69-201ENST00000595306 806 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AL022394.1-201ENST00000606979 292 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 AL008582.1-201ENST00000609612 442 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.78□□□□□ -1.64
SSSCA1O60232 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC103564.3-201ENST00000621194 220 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 AC006453.3-201ENST00000635891 377 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 LINC01808-203ENST00000641932 1643 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 PARP4P2-201ENST00000446672 3326 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC004158.1-201ENST00000564508 4319 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 FBXL21-201ENST00000297158 1305 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 EIF3EP1-201ENST00000433978 1316 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SSSCA1O60232 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.77□□□□□ -1.65
SSSCA1O60232 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SSSCA1O60232 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.77□□□□□ -1.65
SSSCA1O60232 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.77□□□□□ -1.65
SSSCA1O60232 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.77□□□□□ -1.65
SSSCA1O60232 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 AC026310.1-201ENST00000396004 378 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 RNA5SP155-201ENST00000411154 129 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 RN7SKP279-201ENST00000411383 298 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 AL096829.1-201ENST00000413677 457 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.77□□□□□ -1.65
SSSCA1O60232 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.77□□□□□ -1.65
SSSCA1O60232 AC099677.3-201ENST00000427081 395 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.77□□□□□ -1.65
SSSCA1O60232 AC019185.3-201ENST00000438805 323 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSSCA1O60232 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.77□□□□□ -1.65
SSSCA1O60232 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.77□□□□□ -1.65
SSSCA1O60232 RN7SL372P-201ENST00000461982 298 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 AC022730.1-201ENST00000473114 568 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 AC083795.1-201ENST00000491760 320 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 RPSAP51-201ENST00000497462 645 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.77□□□□□ -1.65
SSSCA1O60232 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.77□□□□□ -1.65
SSSCA1O60232 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.77□□□□□ -1.65
SSSCA1O60232 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSSCA1O60232 MIR2117-201ENST00000516780 80 ntBASIC4.77□□□□□ -1.65
SSSCA1O60232 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 343.3 ms