Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXN3O00409 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.73□□□□□ -1.33
FOXN3O00409 AC025283.1-201ENST00000572039 734 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 AC144521.1-201ENST00000607148 956 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 AC005899.6-201ENST00000620729 297 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 HSPD1P8-201ENST00000400121 1658 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 HDAC1P2-201ENST00000453661 1398 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 AC005261.6-201ENST00000623072 1387 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 AC092724.1-201ENST00000624623 3397 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 TMCC1P1-201ENST00000518897 1980 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 RN7SKP237-201ENST00000364663 301 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
FOXN3O00409 AL157702.1-201ENST00000398764 426 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 SEPT7P8-201ENST00000413308 775 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
FOXN3O00409 AC074367.1-201ENST00000438685 1125 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 AK4P6-201ENST00000505168 528 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXN3O00409 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 RNA5SP206-201ENST00000516703 121 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 TDGP1-201ENST00000543961 1229 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 AC023310.2-201ENST00000553844 547 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 CKS1BP1-201ENST00000555221 240 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXN3O00409 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXN3O00409 MIR3157-201ENST00000578688 85 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXN3O00409 AL355802.4-201ENST00000607635 548 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 AP001002.2-201ENST00000625137 386 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 AC116667.2-201ENST00000641075 823 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 AC004014.2-201ENST00000623718 5122 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 SAMMSON-210ENST00000641260 1308 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 Z83820.1-201ENST00000456978 1499 ntBASIC6.72□□□□□ -1.33
FOXN3O00409 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXN3O00409 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXN3O00409 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
FOXN3O00409 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
FOXN3O00409 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.71□□□□□ -1.33
FOXN3O00409 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
FOXN3O00409 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
FOXN3O00409 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
FOXN3O00409 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
FOXN3O00409 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
FOXN3O00409 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.71□□□□□ -1.34
FOXN3O00409 RNA5SP485-201ENST00000365053 119 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
FOXN3O00409 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXN3O00409 AL360013.1-201ENST00000419031 858 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXN3O00409 RPEP4-201ENST00000437636 602 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXN3O00409 RANP2-201ENST00000456833 229 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 RBMY2HP-201ENST00000457961 720 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AC073594.1-201ENST00000462065 364 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 RN7SL39P-201ENST00000462264 297 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AC104629.2-201ENST00000468627 598 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AC105918.1-201ENST00000474399 838 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 MARK2P8-201ENST00000476069 952 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms